Bacteroides caccae ATCC 43185 |
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Putative Bacteroides caccae ATCC 43185 RM systems
Ref: Cheng,A.G. et al. unpublished
REBASE ref # 35114
Complete sequence: 4,570,799 bp
GenBank #: CP102256
REBASE acronym: Bca43185a
Org_num: 61268
All begin NQ555_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2015 | 504 aa hypothetical protein | |||
| 2020 | R | Msa17ORFF1P (100% identity) | Bca43185aORF2045P | |
| 2025 | S | S1.Msa17ORFF1P (100% identity) | S2.Bca43185aORF2045P | |
| 2030 | tyrosine-type recombinase/integrase | |||
| 2035 | DNA binding domain-containing protein | |||
| 2040 | S | S2.Msa17ORFF1P (100% identity) | S1.Bca43185aORF2045P | |
| 2045 | M | M2.Msa17ORFF1P (100% identity) | M2.Bca43185aORF2045P | |
| 2050 | M | M1.Msa17ORFF1P (100% identity) | M1.Bca43185aORF2045P | |
| 2055 | C | C.Msa17ORFG1P (100% identity) | C.Bca43185aORF2045P | |
| 2060 | plasmid recombination protein | |||
| 8670 | ATP-binding protein | |||
| 8675 | M | M1.Msa17ORFWP (100% identity) | M1.Bca43185aORF8675P | |
| 8680 | M | M2.Bun901ORF13185P (100% identity) | M2.Bca43185aORF8675P | |
| 8685 | S | S2.Msa17ORFWP (100% identity) | TCCNNNNNCTG | S1.Bca43185aORF8675P |
| 8690 | tyrosine-type recombinase/integrase | |||
| 8695 | S | S2.BccORFFP (100% identity) | S2.Bca43185aORF8675P | |
| 8700 | R | Msa17ORFWP (100% identity) | Bca43185aORF8675P | |
| 8705 | DUF262 domain-containing protein | |||
| 15145 | AraC family transcriptional regulator | |||
| 15150 | C | C.Msa17ORFW1P (100% identity) | C.Bca43185aORF15165P | |
| 15155 | R | Msa17ORFW1P (96% identity) | Bca43185aORF15165P | |
| 15160 | HNH endonuclease | |||
| 15165 | M | M.Msa17ORFW1P (100% identity) | M.Bca43185aORF15165P | |
| 15170 | S | S4.Msa17ORFW1P (98% identity) | S1.Bca43185aORF15165P | |
| 15175 | S | S3.Msa17ORFW1P (100% identity) | S2.Bca43185aORF15165P | |
| 15180 | S | S2.Msa17ORFW1P (100% identity) | S3.Bca43185aORF15165P | |
| 15185 | tyrosine-type recombinase/integrase | |||
| ??? | S | S1.Msa17ORFW1P (100% identity) | S4.Bca43185aORF15165P | |
| 15195 | 134 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 490 | DGQHR domain-containing protein | |||
| 495 | M | M.PmeBin96ORFEP (100% identity) | M.Bca43185aORF495P | |
| 500 | DUF5712 family protein | |||
| 3110 | site-specific integrase | |||
| 3115 | R | Bca43185ORF3165P (100% identity) | Bca43185aORF3115P | |
| 3120 | BRO family protein | |||
| 3120 | BRO family protein | |||
| 3125 | M | M.Bca43185ORF3165P (100% identity) | M.Bca43185aORF3125P | |
| 3130 | C | C.BcaH1617ORF4140P (100% identity) | C.Bca43185aORF3125P | |
| 3135 | DUF4248 domain-containing protein | |||
| 10525 | 111 aa hypothetical protein | |||
| 10530 | M | M.Msa17ORFI2P (100% identity) | M.Bca43185aORF10530P | |
| 10535 | 182 aa hypothetical protein | |||
| 10575 | NUMOD4 motif-containing HNH endonuclease | |||
| 10580 | M | M.Msa17ORFJ2P (100% identity) | M.Bca43185aORF10580P | |
| 10585 | phosphoadenosine phosphosulfate reductase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8630 | DUF6078 family protein | |||
| 8635 | R | Msa17McrBP (100% identity) | Bca43185aMcrBP | |
| 8640 | R | PmeBin35McrCP (100% identity) | Bca43185aMcrCP | |
| 8645 | 247 aa hypothetical protein | |||