Rhizobium species WSM4643 |
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Putative Rhizobium species WSM4643 RM systems
Ref: Kohlmeier,M.G. et al. unpublished
REBASE ref # 33216
| Sequence length: | GenBank #: | |
| Chromosome: | 4,855,628 bp | CP104040 |
| plasmid pWSM4643_1: | 627,412 bp | CP104041 |
| plasmid pWSM4643_2: | 548,967 bp | CP104042 |
REBASE acronym: Rle4643
Org_num: 61914
All begin N1937_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2090 | 416 aa hypothetical protein | |||
| 2095 | R | AtuA74aSspDP (90% identity) | Rle4643SspDP | |
| 2100 | M | M.SspD48ORF14890P (95% identity) | M.Rle4643SspDP | |
| 2105 | V | V.EspTW10ORFAP (74% identity) | V.Rle4643SspDP | |
| 2110 | 506 aa hypothetical protein | |||
| plasmid pWSM4643_1 | ||||
| 25675 | 45 aa hypothetical protein | |||
| 25680 | RM | Arh1680ORF22280P (82% identity) | Rle4643ORF25680P | |
| 25685 | MarR family transcriptional regulator | |||
| plasmid pWSM4643_2 | ||||
| 29485 | 785 aa hypothetical protein | |||
| 29490 | R | RspAB29ORF12790P (82% identity) | Rle4643ORF29495P | |
| 29495 | M | M.RspAB29ORF12790P (71% identity) | M.Rle4643ORF29495P | |
| 29500 | V | V.SchL1ORF2001P (52% identity) | V.Rle4643ORF29495P | |
| 29505 | DUF5677 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pWSM4643_2 | ||||
| 29460 | winged helix-turn-helix domain-containing | |||
| 29465 | R | MspAR10McrBP (39% identity) | Rle4643McrBP | |
| 29470 | R | Aam10684McrCP (57% identity) | Rle4643McrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3580 | antibiotic biosynthesis monooxygenase | |||
| 3585 | M | M.Rle565ORFCP (100% identity) | GANTC | M.Rle4643ORF3585P |
| 3590 | nuclear transport factor 2 family protein | |||