Escherichia coli PV01-97 |
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Putative Escherichia coli PV01-97 RM systems
Ref: Nakamura,K. et al. unpublished
REBASE ref # 35191
| Sequence length: | GenBank #: | |
| Chromosome: | 5,164,768 bp | AP026754 |
| plasmid pO165_PV01-97_1: | 97,866 bp | AP026755 |
| plasmid pO165_PV01-97_2: | 76,600 bp | AP026756 |
| plasmid pO165_PV01-97_4: | 40,224 bp | AP026758 |
REBASE acronym: EcoPV0197
Org_num: 61564
All begin PV0197_, PV0197_p1-, PV0197_p2-, PV0197_p4-
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 526 | recombination protein | |||
| 527 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoPV0197ORF527P |
| 528 | phage antirepressor protein | |||
| 1293 | 71 aa hypothetical protein | |||
| 1294 | M | M.EcoPV0671ORF1339P (100% identity) | GATC | M.EcoPV0197ORF1294P |
| 1295 | 53 aa hypothetical protein | |||
| 1536 | 70 aa hypothetical protein | |||
| 1537 | M | M.EcoPV0671ORF1559P (100% identity) | GATC | M.EcoPV0197ORF1537P |
| 1538 | regulatory protein | |||
| 1557 | 283 aa hypothetical protein | |||
| 1558 | R | EcoPV0671ORF1581P (100% identity) | CTGCAG | EcoPV0197ORF1559P |
| 1559 | M | M.EcoSTEC032ORF17230P (100% identity) | CTGCAG | M.EcoPV0197ORF1559P |
| 1560 | phage repressor protein CI | |||
| 2507 | 54 aa hypothetical protein | |||
| ??? | M | M.EcoPV0671ORF2384P (100% identity) | M.EcoPV0197ORF2508P | |
| 2509 | transposase | |||
| 2692 | recombination endonuclease | |||
| ??? | M | M.EcoPV0671ORFAP (100% identity) | M.EcoPV0197ORFAP | |
| 2694 | transposase | |||
| 3863 | global DNA-binding transcriptional dual | |||
| 3864 | M | M.EcoPV0671ORF3749P (100% identity) | ATGCAT | M.EcoPV0197ORF3864P |
| 3865 | 59 aa hypothetical protein | |||
| 3971 | D-ribulose-5-phosphate 3-epimerase | |||
| 3972 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPV0197DamP |
| 3973 | cell division protein DamX | |||
| 4964 | 407 aa hypothetical protein | |||
| 4965 | M | M.EcoSTEC405ORF22195P (100% identity) | M.EcoPV0197ORF4965P | |
| 4966 | 49 aa hypothetical protein | |||
| 5062 | 228 aa hypothetical protein | |||
| 5063 | M | M.Eco72929ORF5132P (100% identity) | M.EcoPV0197ORF5063P | |
| 5064 | 180 aa hypothetical protein | |||
| 5081 | 67 aa hypothetical protein | |||
| 5082 | M | M.EcoPV0671ORF4951P (100% identity) | M.EcoPV0197ORF5082P | |
| 5083 | Shiga toxin 2 subunit A | |||
| plasmid pO165_PV01-97_1 | ||||
| 102 | 78 aa hypothetical protein | |||
| 103 | M | M.Efe9LTORF44210P (100% identity) | M.EcoPV0197ORF103P | |
| 104 | recombination-associated protein rdgC | |||
| plasmid pO165_PV01-97_2 | ||||
| 41 | 308 aa hypothetical protein | |||
| 42 | M | M.EcoH25ORF41P (100% identity) | SAY | M.EcoPV0197ORF42P |
| 43 | 72 aa hypothetical protein | |||
| plasmid pO165_PV01-97_4 | ||||
| 19 | plasmid partition protein | |||
| 20 | M | M.SflN101ORF24625P (100% identity) | M.EcoPV0197ORF20P | |
| 21 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4986 | 39 aa hypothetical protein | |||
| 4987 | R | EcoPV0671MrrP (100% identity) | EcoPV0197MrrP | |
| 4988 | IS2 transposase Orf1 | |||