Escherichia coli SF10 |
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Putative Escherichia coli SF10 RM systems
Ref: Zhang,S. et al. unpublished
REBASE ref # 35187
| Sequence length: | GenBank #: | |
| Chromosome: | 4,724,773 bp | CP079767 |
| plasmid pSF10EC-1: | 265,589 bp | CP079765 |
| plasmid pSF10EC-2: | 127,890 bp | CP079766 |
| plasmid pSF10EC-3: | 41,027 bp | CP079768 |
REBASE acronym: EcoSF10
Org_num: 61567
All begin KX927_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5820 | 388 aa hypothetical protein | |||
| 5825 | M | M.EcoHL15ORF5190P (100% identity) | M.EcoSF10ORF5825P | |
| 5830 | S | S1.EcoVEF10ORF18030P (100% identity) | S.EcoSF10ORF5825P | |
| 5835 | YecA family protein | |||
| 5840 | R | EcoHL15ORF5190P (100% identity) | EcoSF10ORF5825P | |
| 5845 | M48 family metallopeptidase | |||
| 10470 | GTPase family protein | |||
| 10475 | M | M.EcoHL15ORF9840P (100% identity) | M.EcoSF10ORF10475P | |
| 10480 | S | S1.EcoHL15ORF9840P (100% identity) | S1.EcoSF10ORF10475P | |
| 10485 | R | EcoHL15ORF9840P (100% identity) | EcoSF10ORF10475P | |
| 10490 | IS1 family transposase | |||
| 15970 | restriction endonuclease | |||
| 15975 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.EcoSF10ORF15975P |
| 15980 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.EcoSF10ORF15975P |
| 15985 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | EcoSF10ORF15975P |
| 15990 | endoribonuclease SymE | |||
| 24575 | IS1 family transposase | |||
| 24580 | S | S.EcoHL15ORF23950P (100% identity) | S.EcoSF10ORF24580P | |
| 24585 | R | EcoHL15ORF23950P (100% identity) | EcoSF10ORF24580P | |
| 24590 | HigA family addiction module antidote protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5115 | phosphohydrolase | |||
| 5120 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSF10DcmP |
| 5125 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoSF10DcmP |
| 5130 | drug/metabolite exporter YedA | |||
| 5285 | 72 aa hypothetical protein | |||
| 5290 | M | M.EcoHL15ORF4655P (100% identity) | M.EcoSF10ORF5290P | |
| 5295 | DUF1317 domain-containing protein | |||
| 20700 | cell division protein DamX | |||
| 20705 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSF10DamP |
| 20710 | ribulose-phosphate 3-epimerase | |||
| 25210 | DUF1382 family protein | |||
| 25215 | M | M.EcoTCM3e1ORF6790P (100% identity) | M.EcoSF10ORF25215P | |
| 25220 | PerC family transcriptional regulator | |||
| plasmid pSF10EC-1 | ||||
| 235 | thermonuclease family protein | |||
| 240 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoSF10ORF240P |
| 245 | 55 aa hypothetical protein | |||
| 850 | 284 aa hypothetical protein | |||
| 855 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoSF10ORF855P |
| 860 | DNA-binding protein | |||
| 970 | 202 aa hypothetical protein | |||
| 975 | M | M.YpsF1ORFBP (100% identity) | M.EcoSF10ORF975P | |
| 980 | 48 aa hypothetical protein | |||
| plasmid pSF10EC-2 | ||||
| 2010 | IS1 family transposase | |||
| 2015 | R | EcoBL12ORF665P (100% identity) | GCWGC | EcoSF10ORF2015P |
| 2020 | XRE family transcriptional regulator | |||
| plasmid pSF10EC-3 | ||||
| 25505 | DUF1382 family protein | |||
| 25510 | M | M.EcoTCM3e1ORF6790P (100% identity) | M.EcoSF10ORF25510P | |
| 25515 | PerC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10600 | IS5 family transposase | |||
| 10605 | R | EcoNT1N34McrCP (100% identity) | EcoSF10McrCP | |
| 10610 | restriction endonuclease | |||
| 15965 | BrnT family toxin | |||
| 15970 | R | SflSTLE3MrrP (100% identity) | EcoSF10MrrP | |
| 15975 | type I restriction-modification system subunit | |||