Escherichia coli GS04 |
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Putative Escherichia coli GS04 RM systems
Ref: Zhang,S. et al. unpublished
REBASE ref # 35187
| Sequence length: | GenBank #: | |
| Chromosome: | 4,593,935 bp | CP079772 |
| plasmid pGS04EC-1: | 106,228 bp | CP079773 |
| plasmid pGS04EC-2: | 76,462 bp | CP079774 |
REBASE acronym: EcoGS04
Org_num: 61543
All begin KYX57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pGS04EC-2 | ||||
| 23400 | chromosome segregation protein SMC | |||
| 23405 | M | M.SenS1545ORF24780P (100% identity) | M.EcoGS04ORF23405P | |
| 23410 | R | SenS1545ORF24780P (100% identity) | EcoGS04ORF23405P | |
| 23415 | ANR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1385 | recombination protein NinB | |||
| 1390 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoGS04ORF1390P |
| 1395 | NinE family protein | |||
| 3525 | phosphohydrolase | |||
| 3530 | M | M.EcoBL12DcmP (100% identity) | CCWGG | M.EcoGS04DcmP |
| 3535 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoGS04DcmP |
| 3540 | drug/metabolite exporter YedA | |||
| 5705 | DUF977 family protein | |||
| ??? | M | M.Ecoi029ORF11125P (100% identity) | M.EcoGS04ORF5710P | |
| 5715 | 60 aa hypothetical protein | |||
| 14220 | HNH endonuclease | |||
| 14225 | R | EcoW619ORFAP (96% identity) | EcoGS04ORF14225P | |
| 14230 | 100 aa hypothetical protein | |||
| 18940 | cell division protein DamX | |||
| 18945 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoGS04DamP |
| 18950 | ribulose-phosphate 3-epimerase | |||
| 19565 | DUF2556 family protein | |||
| 19570 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoGS04ORF19570P |
| 19575 | DNA-binding transcriptional regulator Fis | |||
| plasmid pGS04EC-1 | ||||
| 22935 | 76 aa hypothetical protein | |||
| 22940 | M | M.Ecosa7ORFDP (100% identity) | M.EcoGS04ORF22940P | |
| 22945 | 290 aa hypothetical protein | |||
| plasmid pGS04EC-2 | ||||
| 23250 | 73 aa hypothetical protein | |||
| 23255 | M | M.Xca80ORFEP (100% identity) | M.EcoGS04ORF23255P | |
| 23260 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14230 | 100 aa hypothetical protein | |||
| 14235 | R | Ecos19ORF20250P (100% identity) | EcoGS04ORF14240P | |
| 14240 | M | M.EcoXH990ORF24545P (100% identity) | M.EcoGS04ORF14240P | |
| 14245 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14030 | endoribonuclease SymE | |||
| 14035 | R | EcoXH990GmrSDP (100% identity) | EcoGS04GmrSDP | |
| 14040 | DUF1127 domain-containing protein | |||