Escherichia coli BL12 |
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Putative Escherichia coli BL12 RM systems
Ref: Zhang,S. et al. unpublished
REBASE ref # 35187
| Sequence length: | GenBank #: | |
| Chromosome: | 4,594,222 bp | CP079780 |
| plasmid pBL12EC-1: | 106,228 bp | CP079776 |
| plasmid pBL12EC-2: | 119,769 bp | CP079777 |
| plasmid pBL12EC-3: | 76,462 bp | CP079778 |
REBASE acronym: EcoBL12
Org_num: 61540
All begin KYX59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7285 | M48 family metallopeptidase | |||
| 7290 | R | EcoGS04ORF3840P (100% identity) | EcoBL12ORF7305P | |
| 7295 | YecA family protein | |||
| 7300 | S | S.EcoGS04ORF3840P (100% identity) | S.EcoBL12ORF7305P | |
| 7305 | M | M.EcoNT1F31ORF10715P (100% identity) | M.EcoBL12ORF7305P | |
| 7310 | 388 aa hypothetical protein | |||
| plasmid pBL12EC-3 | ||||
| 1500 | chromosome segregation protein SMC | |||
| 1505 | M | M.SenS1545ORF24780P (100% identity) | M.EcoBL12ORF1505P | |
| 1510 | R | SenS1545ORF24780P (100% identity) | EcoBL12ORF1505P | |
| 1515 | ANR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7605 | drug/metabolite exporter YedA | |||
| 7610 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoBL12DcmP |
| 7615 | M | M.EcoGS04DcmP (100% identity) | CCWGG | M.EcoBL12DcmP |
| 7620 | phosphohydrolase | |||
| 9755 | NinE family protein | |||
| 9760 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoBL12ORF9760P |
| 9765 | recombination protein NinB | |||
| 14010 | DNA-binding transcriptional regulator Fis | |||
| 14015 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoBL12ORF14015P |
| 14020 | DUF2556 family protein | |||
| 14640 | ribulose-phosphate 3-epimerase | |||
| 14645 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoBL12DamP |
| 14650 | cell division protein DamX | |||
| 19360 | 100 aa hypothetical protein | |||
| 19365 | R | EcoW619ORFAP (96% identity) | EcoBL12ORF19365P | |
| 19370 | HNH endonuclease | |||
| plasmid pBL12EC-1 | ||||
| 315 | 290 aa hypothetical protein | |||
| 320 | M | M.Ecosa7ORFDP (100% identity) | M.EcoBL12ORF320P | |
| 325 | 76 aa hypothetical protein | |||
| plasmid pBL12EC-2 | ||||
| 660 | IS1 family transposase | |||
| 665 | R | EcoSF10ORF2015P (100% identity) | GCWGC | EcoBL12ORF665P |
| 670 | XRE family transcriptional regulator | |||
| plasmid pBL12EC-3 | ||||
| 1350 | 73 aa hypothetical protein | |||
| 1355 | M | M.Xca80ORFEP (100% identity) | M.EcoBL12ORF1355P | |
| 1360 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19345 | DEAD/DEAH box helicase family protein | |||
| 19350 | M | M.EcoXH990ORF24545P (100% identity) | M.EcoBL12ORF19350P | |
| 19355 | R | Ecos19ORF20250P (100% identity) | EcoBL12ORF19350P | |
| 19360 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19550 | DUF1127 domain-containing protein | |||
| 19555 | R | EcoXH990GmrSDP (100% identity) | EcoBL12GmrSDP | |
| 19560 | endoribonuclease SymE | |||