Escherichia coli DLI.5a |
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Putative Escherichia coli DLI.5a RM systems
Ref: Ibarra,D.L. et al. unpublished
REBASE ref # 35188
Complete sequence: 4,938,303 bp
GenBank #: CP103972
REBASE acronym: EcoDLI5a
Org_num: 61541
All begin NZD79_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3860 | drug/metabolite exporter YedA | |||
| 3865 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoDLI5aDcmP |
| 3870 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoDLI5aDcmP |
| 3875 | phosphohydrolase | |||
| 8975 | integrase arm-type DNA-binding domain-containing | |||
| 8980 | M | M.EcoS7380ORFCP (100% identity) | M.EcoDLI5aORF8980P | |
| 8985 | R | Eco895ORF11440P (100% identity) | EcoDLI5aORF8980P | |
| 8990 | DUF3696 domain-containing protein | |||
| 10915 | DNA-binding transcriptional regulator Fis | |||
| 10920 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoDLI5aORF10920P |
| 10925 | DUF2556 family protein | |||
| 11540 | ribulose-phosphate 3-epimerase | |||
| 11545 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDLI5aDamP |
| 11550 | cell division protein DamX | |||
| 13330 | holin | |||
| 13335 | M | M.EcoVL02ORF18020P (100% identity) | M.EcoDLI5aORF13335P | |
| 13340 | 401 aa hypothetical protein | |||
| 18900 | 257 aa hypothetical protein | |||
| 18905 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoDLI5aORF18905P |
| 18910 | R | EcoTZ118ORF22710P (99% identity) | CCWGG | EcoDLI5aORF18905P |
| 18915 | 449 aa hypothetical protein | |||
| 23300 | TrmB family transcriptional regulator | |||
| 23305 | M | M.SsoL4094ORF17815P (35% identity) | M.EcoDLI5aORF23305AP | |
| 23310 | IS4-like element IS421 family transposase | |||
| 23315 | M | M.Eco895ORF1395BP (93% identity) | M.EcoDLI5aORF23305BP | |
| 23335 | 39 aa hypothetical protein | |||
| 24175 | RusA family crossover junction | |||
| 24180 | M | M.Eco895ORF2240P (96% identity) | M.EcoDLI5aORF24180P | |
| 24200 | 39 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9190 | S8 family peptidase | |||
| 9195 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.EcoDLI5aORF9195P |
| 9200 | R | Kpn0718ORF815P (100% identity) | ACCACC | EcoDLI5aORF9195P |
| 9205 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16220 | IS3 family transposase | |||
| 16225 | R | Eco9427McrCP (99% identity) | EcoDLI5aMcrCP | |
| 16230 | R | Kpn0718McrBP (100% identity) | EcoDLI5aMcrBP | |
| 16235 | zinc-ribbon domain-containing protein | |||
| 16885 | DUF1127 domain-containing protein | |||
| ??? | R | Eco24MSGmrSDP (100% identity) | EcoDLI5aGmrSDP | |
| 16900 | endoribonuclease SymE | |||
| 16915 | type I restriction-modification system subunit | |||
| 16920 | R | EfeE4C07MrrP (100% identity) | EcoDLI5aMrrP | |
| 16925 | BrnT family toxin | |||