Escherichia coli 3359 |
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Putative Escherichia coli 3359 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,852,013 bp | CP103739 |
| plasmid pMB2910_1: | 208,091 bp | CP103740 |
| plasmid pMB2910_2: | 96,149 bp | CP103741 |
REBASE acronym: Eco3359
Org_num: 61521
All begin M5T33_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7005 | recombination protein NinB | |||
| 7010 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco3359ORF7010P |
| 7015 | NinE family protein | |||
| 14515 | drug/metabolite exporter YedA | |||
| 14520 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco3359DcmP |
| 14525 | M | M.EcoNEC13DcmP (100% identity) | CCWGG | M.Eco3359DcmP |
| 14530 | phosphohydrolase | |||
| 15490 | phage portal protein | |||
| 15495 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.Eco3359ORF15495P |
| 15500 | 501 aa hypothetical protein | |||
| 15495 | DNA adenine methylase | |||
| 15500 | R | EcoR7ORF1275P (100% identity) | TGGCCA | Eco3359ORF15500P |
| 15505 | replication endonuclease | |||
| 21880 | DNA-binding transcriptional regulator Fis | |||
| 21885 | M | M.EcoNEC13ORF16600P (100% identity) | ATGCAT | M.Eco3359ORF21885P |
| 21890 | DUF2556 family protein | |||
| 22525 | ribulose-phosphate 3-epimerase | |||
| 22530 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3359DamP |
| 22535 | cell division protein DamX | |||
| plasmid pMB2910_1 | ||||
| 23890 | 103 aa hypothetical protein | |||
| 23895 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco3359ORF23895P |
| 23900 | 73 aa hypothetical protein | |||
| plasmid pMB2910_2 | ||||
| 25265 | recombination-associated protein RdgC | |||
| 25270 | M | M.EcoSTEFF1ORF24540P (100% identity) | M.Eco3359ORF25270P | |
| 25285 | tellurite/colicin resistance protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3710 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 3715 | R | EcosS9McrCP (100% identity) | Eco3359McrCP | |
| 3720 | R | EcosS3McrBP (100% identity) | Eco3359McrBP | |
| 3725 | glycosyltransferase | |||