Klebsiella michiganensis 5088 |
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Putative Klebsiella michiganensis 5088 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 5,944,805 bp | CP103554 |
| plasmid pMB8590_1: | 188,758 bp | CP103555 |
| plasmid pMB8590_2: | 110,337 bp | CP103556 |
REBASE acronym: Kmi5088
Org_num: 61597
All begin M5R35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24480 | 322 aa hypothetical protein | |||
| 24485 | R | Kox1ORF27875P (100% identity) | CCANNNNNNNNCTCC | Kmi5088ORF24490P |
| 24490 | M | M.Kox1ORF27875P (100% identity) | CCANNNNNNNNCTCC | M.Kmi5088ORF24490P |
| 24495 | S | S.Kox1ORF27875P (100% identity) | CCANNNNNNNNCTCC | S.Kmi5088ORF24490P |
| 24500 | endoribonuclease SymE | |||
| plasmid pMB8590_2 | ||||
| 29455 | DUF262 domain-containing protein | |||
| 29460 | M | M.Kqu610ORF27150P (100% identity) | M.Kmi5088ORF29460P | |
| 29465 | S | S.Kqu610ORF27150P (100% identity) | S.Kmi5088ORF29460P | |
| 29470 | R | Kqu610ORF27150P (100% identity) | Kmi5088ORF29460P | |
| 29475 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1965 | cell division protein DamX | |||
| 1970 | M | M.Ksp6FDamP (100% identity) | GATC | M.Kmi5088DamP |
| 1975 | ribulose-phosphate 3-epimerase | |||
| 9920 | DNA primase | |||
| 9925 | M | M.KvaEMBL1ORF9100P (100% identity) | M.Kmi5088ORF9925P | |
| 9930 | 60 aa hypothetical protein | |||
| 10070 | phosphohydrolase | |||
| 10075 | M | M.Kox1DcmP (100% identity) | CCWGG | M.Kmi5088DcmP |
| 10080 | V | V.KpnK516DcmP (100% identity) | V.Kmi5088DcmP | |
| 10085 | drug/metabolite exporter YedA | |||
| 18380 | YlcG family protein | |||
| 18385 | M | M.Kox324ORF3601P (100% identity) | GATC | M.Kmi5088ORF18385P |
| 18390 | recombination protein NinG | |||
| 18410 | 172 aa hypothetical protein | |||
| 18415 | M | M.Kmi167ORF11005P (100% identity) | M.Kmi5088ORF18415P | |
| 18420 | 189 aa hypothetical protein | |||
| 24840 | BREX system P-loop protein BrxC | |||
| 24845 | RM | Ero1430ORF17695P (66% identity) | Kmi5088ORF24845P | |
| 24850 | ATP-binding protein | |||
| plasmid pMB8590_1 | ||||
| 28325 | IS1 family transposase | |||
| 28330 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kmi5088ORF28330P |
| 28335 | R | YpsR1ORFAP (100% identity) | CCWGG | Kmi5088ORF28330P |
| 28340 | EAL domain-containing protein | |||
| plasmid pMB8590_2 | ||||
| 29505 | 80 aa hypothetical protein | |||
| 29510 | M | M.Kqu610ORF27200P (100% identity) | M.Kmi5088ORF29510P | |
| 29515 | 280 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24910 | 62 aa hypothetical protein | |||
| 24915 | R | KpnF4McrBP (98% identity) | Kmi5088McrBP | |
| 24920 | R | Kqu10429McrCP (97% identity) | Kmi5088McrCP | |
| 24925 | DUF4234 domain-containing protein | |||