Escherichia coli 4848 |
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Putative Escherichia coli 4848 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,737,400 bp | CP103596 |
| plasmid pMB7536_2: | 68,086 bp | CP103598 |
REBASE acronym: Eco4848
Org_num: 61529
All begin M5T19_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4848DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4848ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 8910 | phosphohydrolase | |||
| 8915 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco4848DcmP |
| 8920 | V | V.SflSTLE1DcmP (100% identity) | V.Eco4848DcmP | |
| 8925 | drug/metabolite exporter YedA | |||
| 10940 | DUF977 family protein | |||
| 10945 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco4848ORF10945P | |
| 10950 | IS66-like element ISEc22 family transposase | |||
| 12800 | DUF3927 family protein | |||
| 12815 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco4848ORF12815P |
| 12820 | TrmB family transcriptional regulator | |||
| 19535 | HNH endonuclease | |||
| 19540 | R | SflSTLE4ORF19250P (100% identity) | Eco4848ORF19540P | |
| 19545 | McrC family protein | |||
| 19910 | sigma 54-interacting transcriptional regulator | |||
| 19915 | R | Ecop10BORF20145P (100% identity) | Eco4848ORF19915P | |
| 19920 | IS21-like element IS100 family transposase | |||
| plasmid pMB7536_2 | ||||
| 23660 | recombinase family protein | |||
| 23665 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco4848ORF23670P |
| 23670 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco4848ORF23670P |
| 23675 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19540 | HNH endonuclease | |||
| 19545 | R | SflSTLE4McrCP (100% identity) | Eco4848McrCP | |
| 19550 | R | SflSTLE4McrBP (100% identity) | Eco4848McrBP | |
| 19555 | DUF4942 domain-containing protein | |||