Salmonella enterica S1905 |
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Putative Salmonella enterica S1905 RM systems
Ref: Yue,M. unpublished
REBASE ref # 30996
| Sequence length: | GenBank #: | |
| Chromosome: | 4,952,513 bp | CP103771 |
| plasmid pS1905_1: | 85,991 bp | CP103772 |
| plasmid pS1905_2: | 5,269 bp | CP103773 |
REBASE acronym: SenS1905
Org_num: 61994
All begin NYS49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | 165 aa hypothetical protein | |||
| 2340 | R | SenW714ORF20525P (100% identity) | SenS1905ORF2350P | |
| 2345 | S | S.SenW714ORF20525P (100% identity) | S.SenS1905ORF2350P | |
| 2350 | M | M.SenW714ORF20525P (100% identity) | M.SenS1905ORF2350P | |
| 2355 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.Eco71340ORFDP (88% identity) | M.SenS1905ORF15P | |
| 20 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| 2315 | integrase arm-type DNA-binding domain-containing | |||
| 2320 | R | SenW714ORF20555P (100% identity) | GAAC | SenS1905ORF2320P |
| 2325 | integrase | |||
| 2485 | 64 aa hypothetical protein | |||
| 2490 | R | SenW714ORF20385P (100% identity) | SenS1905ORF2490P | |
| 2495 | YebC/PmpR family DNA-binding transcriptional | |||
| 2885 | PerC family transcriptional regulator | |||
| 2890 | M | M.Sso90ORF15820P (100% identity) | GATC | M.SenS1905ORF2890P |
| 2895 | LexA family transcriptional regulator | |||
| 2925 | 67 aa hypothetical protein | |||
| 2930 | M | M.SenW714ORF19970P (100% identity) | M.SenS1905ORF2930P | |
| 2935 | phage lysis protein EssD | |||
| 13180 | drug/metabolite exporter YedA | |||
| 13185 | V | V.SenW714DcmP (100% identity) | V.SenS1905DcmP | |
| 13190 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenS1905DcmP |
| 13195 | phosphohydrolase | |||
| 20240 | DNA-binding transcriptional regulator Fis | |||
| 20245 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS1905ORF20245P |
| 20250 | DUF2556 family protein | |||
| 20730 | ribulose-phosphate 3-epimerase | |||
| 20735 | M | M.SenW714DamP (100% identity) | GATC | M.SenS1905DamP |
| 20740 | cell division protein DamX | |||
| plasmid pS1905_1 | ||||
| 24170 | 103 aa hypothetical protein | |||
| 24175 | M | M.Ssp14523ORF22990P (100% identity) | M.SenS1905ORF24175P | |
| 24180 | 73 aa hypothetical protein | |||
| plasmid pS1905_2 | ||||
| 24570 | Rop family plasmid primer RNA-binding protein | |||
| 24575 | M | M.EcoI105ORF120P (100% identity) | CCGCGG | M.SenS1905ORF24575P |
| 24580 | R | SenpCI (100% identity) | CCGCGG | SenS1905ORF24575P |
| 24585 | MbeD family mobilization/exclusion protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5180 | MFS transporter | |||
| 5185 | M | M.SenW714ORF17715P (100% identity) | CAGAG | M.SenS1905ORF5185P |
| 5190 | R | SenW714ORF17715P (100% identity) | CAGAG | SenS1905ORF5185P |
| 5195 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2630 | type I restriction-modification system | |||
| 2635 | R | SenW714MrrP (100% identity) | SenS1905MrrP | |
| 2640 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16915 | replication endonuclease | |||
| 16920 | M | M.SenW714ORF5945P (100% identity) | GATC | M.SenS1905ORF16920P |
| 16925 | 3-5 exonuclease | |||