Glaesserella parasuis 1433 |
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Putative Glaesserella parasuis 1433 RM systems
Ref: Spergser,J. and Ladinig,A. unpublished
REBASE ref # 35197
Complete sequence: 2,249,406 bp
GenBank #: CP103327
REBASE acronym: Gpa1433
Org_num: 61580
All begin NXZ66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4855 | 3-phosphoserine/phosphohydroxythreonine | |||
| 4860 | M | M.Gpa1804ORF5095P (98% identity) | M.Gpa1433ORF4860P | |
| 4865 | S | S.GpaHPS12ORF5150P (63% identity) | S.Gpa1433ORF4860P | |
| 4870 | 41 aa hypothetical protein | |||
| 4875 | R | Hpa174ORF186P (99% identity) | Gpa1433ORF4860P | |
| 4880 | histidinol-phosphate transaminase | |||
| 10755 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 10760 | S | S.GpaHPS12ORF10755P (99% identity) | GTANNNNNNNCTTG | S.Gpa1433ORF10775P |
| 10765 | R | GpaHPS12ORF10755P (99% identity) | GTANNNNNNNCTTG | Gpa1433ORF10775P |
| 10770 | DNA binding domain-containing protein | |||
| 10775 | M | M.Hpa1401ORF5210P (99% identity) | GTANNNNNNNCTTG | M.Gpa1433ORF10775P |
| 10780 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 270 | valine--tRNA ligase | |||
| 275 | M | M.Gpad76ORF340P (100% identity) | AAGCTT | M.Gpa1433ORF275P |
| ??? | R | Gpad76ORF340P (100% identity) | AAGCTT | Gpa1433ORF275P |
| 290 | zeta toxin family protein | |||
| 880 | MarR family winged helix-turn-helix | |||
| 885 | RM | GpaHPS7ORF940P (99% identity) | Gpa1433ORF885P | |
| 890 | S | S1.Gpa4ORF1255P (97% identity) | S1.Gpa1433ORF885P | |
| 895 | S | S2.Gpad76ORF945P (100% identity) | S2.Gpa1433ORF885P | |
| 900 | virulence RhuM family protein | |||
| 3010 | sodium-dependent transporter | |||
| 3015 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpa1433ORF3015P |
| 3020 | 3-dehydroquinate synthase | |||
| 6910 | 305 aa hypothetical protein | |||
| 6915 | M | M.GpaHPS7ORF3655P (44% identity) | M.Gpa1433ORF6915P | |
| 6920 | 58 aa hypothetical protein | |||
| 7875 | enoyl-CoA hydratase | |||
| 7880 | M | M.Gpad76ORF8420P (100% identity) | M.Gpa1433ORF7880P | |
| 7885 | 86 aa hypothetical protein | |||
| 9685 | 90 aa hypothetical protein | |||
| 9690 | S | S.Gpad76ORF10045P (100% identity) | S.Gpa1433ORF9695P | |
| ??? | M | Gpad76ORF10045P (97% identity) | M.Gpa1433ORF9695P | |
| 9705 | ABC transporter six-transmembrane | |||
| 9720 | 192 aa hypothetical protein | |||
| 9725 | R | Gpad76ORF10080P (99% identity) | Gpa1433ORF9730P | |
| 9730 | M | M.Gpad76ORF10080P (100% identity) | M.Gpa1433ORF9730P | |
| 9735 | NADH:flavin oxidoreductase/NADH oxidase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9400 | FAD-dependent oxidoreductase | |||
| 9405 | R | GpaZ44GmrSDP (96% identity) | Gpa1433GmrSDP | |
| 9410 | amino acid ABC transporter ATP-binding protein | |||