Bacteroides fragilis BFG-506 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides fragilis BFG-506 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,433,848 bp
GenBank #: CP103253
REBASE acronym: Bfr506
Org_num: 61300
All begin NXV41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | DUF2971 domain-containing protein | |||
| ??? | M | M.BfrGUT04ORFCP (100% identity) | M.Bfr506ORF2095P | |
| ??? | S | S.BfrBFG16ORF1985P (100% identity) | S.Bfr506ORF2095P | |
| 2120 | transposase | |||
| 9225 | helix-turn-helix transcriptional regulator | |||
| 9230 | R | Pvu191ORF6480P (100% identity) | Bfr506ORF9240P | |
| 9235 | GIY-YIG nuclease family protein | |||
| 9240 | M | M.Pvu191ORF6480P (100% identity) | M.Bfr506ORF9240P | |
| 9245 | virulence RhuM family protein | |||
| 9250 | S | S1.BxyC03ORF179P (34% identity) | S1.Bfr506ORF9240P | |
| 9255 | S | S1.Bth478ORF12055P (64% identity) | S2.Bfr506ORF9240P | |
| 9260 | S | S2.Bth478ORF12055P (100% identity) | S3.Bfr506ORF9240P | |
| ??? | S | S3.Pvu191ORF6480P (100% identity) | S4.Bfr506ORF9240P | |
| 9270 | S | S4.Bth478ORF12055P (100% identity) | S5.Bfr506ORF9240P | |
| 9275 | site-specific integrase | |||
| 14065 | mobilization protein | |||
| ??? | S | S.BfrQ1F2ORF9865P (100% identity) | S.Bfr506ORF14075P | |
| 14075 | M | M.BfrQ1F2ORF9865P (100% identity) | M.Bfr506ORF14075P | |
| 14080 | C | C.Bfr85ORF14115P (100% identity) | C.Bfr506ORF14075P | |
| 14085 | amidoligase enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9630 | restriction endonuclease | |||
| 9635 | RM | Bth264aORF13290P (98% identity) | Bfr506ORF9635P | |
| 9640 | helicase-related protein | |||
| 13800 | 71 aa hypothetical protein | |||
| 13805 | M | M.Bfr506ORF15270P (85% identity) | M.Bfr506ORF13805P | |
| 13810 | DUF4373 domain-containing protein | |||
| 13970 | 80 aa hypothetical protein | |||
| 13975 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr506ORF13975P | |
| 13980 | 55 aa hypothetical protein | |||
| 15265 | 64 aa hypothetical protein | |||
| 15270 | M | M.Bfr506ORF13805P (85% identity) | M.Bfr506ORF15270P | |
| 15275 | 85 aa hypothetical protein | |||
| 16730 | 240 aa hypothetical protein | |||
| 16735 | M | M.Bth266ORF14520P (100% identity) | M.Bfr506ORF16735P | |
| 16740 | DUF5045 domain-containing protein | |||
| 16765 | 117 aa hypothetical protein | |||
| 16770 | M | M.Bth119ORF13585P (99% identity) | M.Bfr506ORF16770P | |
| 16775 | conjugative transposon protein TraN | |||
| 18135 | 241 aa hypothetical protein | |||
| 18140 | M | M.PvuC06ORF1788P (100% identity) | M.Bfr506ORF18140P | |
| 18145 | DUF5045 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9170 | pseudouridine synthase | |||
| 9175 | R | BfrGUT04ORFBP (99% identity) | Bfr506ORF9180P | |
| 9180 | M | M.Bfr526ORF9400P (99% identity) | M.Bfr506ORF9180P | |
| 9185 | discoidin domain-containing protein | |||