Bacteroides fragilis BFG-604 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides fragilis BFG-604 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,204,505 bp
GenBank #: CP103225
REBASE acronym: Bfr604
Org_num: 61310
All begin NXV67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8885 | helix-turn-helix transcriptional regulator | |||
| 8890 | R | Pvu191ORF6480P (100% identity) | Bfr604ORF8900P | |
| 8895 | GIY-YIG nuclease family protein | |||
| 8900 | M | M.Pvu191ORF6480P (100% identity) | M.Bfr604ORF8900P | |
| 8905 | virulence RhuM family protein | |||
| 8910 | S | S1.Pvu191ORF6480P (100% identity) | S1.Bfr604ORF8900P | |
| 8915 | S | S2.Bth478ORF12055P (100% identity) | S2.Bfr604ORF8900P | |
| ??? | S | S3.Pvu191ORF6480P (100% identity) | S3.Bfr604ORF8900P | |
| 8925 | S | S4.Pvu191ORF6480P (100% identity) | S4.Bfr604ORF8900P | |
| 8930 | site-specific integrase | |||
| 10455 | flippase-like domain-containing protein | |||
| 10460 | S | S2.Pme3C08ORF3808P (55% identity) | S4.Bfr604ORF10485P | |
| 10465 | S | S3.Bfr89ORF10375P (100% identity) | S3.Bfr604ORF10485P | |
| 10470 | tyrosine-type recombinase/integrase | |||
| 10475 | S | S2.Bfr23ORF17120P (100% identity) | S2.Bfr604ORF10485P | |
| 10480 | S | S1.Bfr89ORF10375P (100% identity) | S1.Bfr604ORF10485P | |
| 10485 | M | M.Bfr89ORF10375P (100% identity) | M.Bfr604ORF10485P | |
| 10490 | R | Bfr23ORF17120P (100% identity) | Bfr604ORF10485P | |
| 10495 | type II toxin-antitoxin system HigB family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13445 | 241 aa hypothetical protein | |||
| 13450 | M | M.PmeBin18ORFDP (100% identity) | M.Bfr604ORF13450P | |
| 13455 | DUF5045 domain-containing protein | |||
| 16210 | thymidylate synthase | |||
| 16215 | M | M.PmeBin1ORFBP (100% identity) | M.Bfr604ORF16215P | |
| 16220 | 144 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8835 | pseudouridine synthase | |||
| 8840 | R | BfrBOB25ORF4955P (100% identity) | Bfr604ORF8845P | |
| 8845 | M | M.BfrBOB25ORF4955P (100% identity) | M.Bfr604ORF8845P | |
| 8850 | discoidin domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17060 | imidazole glycerol phosphate synthase subunit | |||
| 17075 | R | Bfr640GmrSDP (100% identity) | Bfr604GmrSDP | |
| 17080 | pyridoxamine 5-phosphate oxidase family | |||