Parabacteroides distasonis BFG-157 |
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Putative Parabacteroides distasonis BFG-157 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,335,766 bp
GenBank #: CP103222
REBASE acronym: Pdi157
Org_num: 61801
All begin NXV66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12445 | 132 aa hypothetical protein | |||
| 12450 | S | S4.Pdi149ORF12330P (66% identity) | S4.Pdi157ORF12475P | |
| 12455 | S | S3.PdiPdIVP (36% identity) | S3.Pdi157ORF12475P | |
| 12460 | tyrosine-type recombinase/integrase | |||
| 12465 | S | S2.PdiPdIV (100% identity) | CAAYNNNNNNNTGG | S2.Pdi157ORF12475P |
| 12470 | S | S1.Pdi149ORF12330P (100% identity) | S1.Pdi157ORF12475P | |
| 12475 | M | M.PdiPdIV (100% identity) | M.Pdi157ORF12475P | |
| 12480 | R | PdiPdIVP (100% identity) | Pdi157ORF12475P | |
| 12485 | C | C.PdiPdIVP (100% identity) | C.Pdi157ORF12475P | |
| 12490 | TIR domain-containing protein | |||
| 12570 | AAA family ATPase | |||
| 12575 | M | M.Pdi149ORF12425P (100% identity) | M.Pdi157ORF12575P | |
| 12580 | metallophosphoesterase | |||
| 12620 | DUF6078 family protein | |||
| 12625 | R | Pdi149ORF12490P (100% identity) | Pdi157ORF12640P | |
| 12630 | S | S.Pdi149ORF12490P (100% identity) | S.Pdi157ORF12640P | |
| 12635 | AAA family ATPase | |||
| 12640 | M | M.Pdi149ORF12490P (100% identity) | M.Pdi157ORF12640P | |
| 12645 | GIY-YIG nuclease family protein | |||
| 17630 | 132 aa hypothetical protein | |||
| 17635 | S | S3.PdiS2PDORF3300P (97% identity) | S3.Pdi157ORF17690P | |
| 17640 | 134 aa hypothetical protein | |||
| 17645 | transposase | |||
| 17650 | 455 aa hypothetical protein | |||
| 17655 | IS1380 family transposase | |||
| 17660 | tyrosine-type recombinase/integrase | |||
| 17665 | S | S2.PdiS2PDORF3300P (100% identity) | S2.Pdi157ORF17690P | |
| 17670 | S | S1.PdiS2PDORF3300P (100% identity) | S1.Pdi157ORF17690P | |
| 17675 | 143 aa hypothetical protein | |||
| 17680 | 141 aa hypothetical protein | |||
| 17685 | virulence RhuM family protein | |||
| 17690 | M | M.PdiS2PDORF3300P (100% identity) | M.Pdi157ORF17690P | |
| 17695 | R | PdiS2PDORF3300P (100% identity) | Pdi157ORF17690P | |
| 17700 | C | C.PdiS2PDORF3300P (100% identity) | C.Pdi157ORF17690P | |
| 17705 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13370 | DUF4270 domain-containing protein | |||
| 13375 | RM | Pdi149ORF13210P (80% identity) | Pdi157ORF13375P | |
| 13380 | site-specific integrase | |||
| 15410 | DUF6383 domain-containing protein | |||
| 15415 | M | M.PmeBin29ORFBP (100% identity) | CCWGG | M.Pdi157ORF15415P |
| 15420 | helix-turn-helix domain-containing protein | |||
| 15425 | R | PspCT06IIP (100% identity) | CCWGG | Pdi157ORF15415P |
| 15430 | PCMD domain-containing protein | |||
| 16870 | fructose-6-phosphate aldolase | |||
| 16875 | M | M.Pdi149ORF16650P (100% identity) | CGCG | M.Pdi157ORF16875P |
| 16880 | 287 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12410 | mobilization protein | |||
| 12415 | R | Pdi149MrrP (100% identity) | Pdi157MrrP | |
| 12420 | helix-turn-helix domain-containing protein | |||