Bacteroides fragilis BFG-642 |
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Putative Bacteroides fragilis BFG-642 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,543,989 bp
GenBank #: CP103199
REBASE acronym: Bfr642
Org_num: 61314
All begin NXV98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2525 | DUF2971 domain-containing protein | |||
| ??? | M | M.BfrGUT04ORFCP (73% identity) | M.Bfr642ORF2530P | |
| 2540 | tyrosine recombinase | |||
| 9705 | 53 aa hypothetical protein | |||
| 9710 | S | S2.Bfr502ORF9035P (100% identity) | S2.Bfr642ORF9720P | |
| 9715 | S | S1.Bfr502ORF9035P (99% identity) | S1.Bfr642ORF9720P | |
| 9720 | M | M.Bfr502ORF9035P (100% identity) | M.Bfr642ORF9720P | |
| 9725 | C | C.Bfr502ORF9035P (100% identity) | C.Bfr642ORF9720P | |
| 9730 | AAA family ATPase | |||
| 9970 | helix-turn-helix transcriptional regulator | |||
| 9975 | R | Bfr502ORF9295P (100% identity) | Bfr642ORF9985P | |
| 9980 | GIY-YIG nuclease family protein | |||
| 9985 | M | M.Pvu3C24ORF1473P (100% identity) | M.Bfr642ORF9985P | |
| 9990 | virulence RhuM family protein | |||
| 9995 | S | S4.Bfr638ORF1144P (86% identity) | S1.Bfr642ORF9985P | |
| 10000 | S | S3.BthI5482ORF12005P (100% identity) | S2.Bfr642ORF9985P | |
| 10005 | S | S2.Msa17ORFB2P (100% identity) | S3.Bfr642ORF9985P | |
| 10010 | S | S4.Bov258ORF13515P (60% identity) | S4.Bfr642ORF9985P | |
| 10015 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3585 | DUF3846 domain-containing protein | |||
| 3590 | M | M.BunC05ORF884P (99% identity) | M.Bfr642ORF3590P | |
| 3595 | 156 aa hypothetical protein | |||
| 9635 | helix-turn-helix domain-containing protein | |||
| 9640 | RM | Bfr502ORF8955P (100% identity) | Bfr642ORF9640P | |
| 9645 | 204 aa hypothetical protein | |||
| 10510 | 67 aa hypothetical protein | |||
| 10515 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr642ORF10515P | |
| 10520 | 80 aa hypothetical protein | |||
| 12490 | 78 aa hypothetical protein | |||
| 12495 | M | M.Bfr502ORF11485P (100% identity) | M.Bfr642ORF12495P | |
| 12500 | 161 aa hypothetical protein | |||
| 12890 | 130 aa hypothetical protein | |||
| 12895 | M | M.Msa17ORFI2P (96% identity) | M.Bfr642ORF12895P | |
| 12900 | 182 aa hypothetical protein | |||
| 15510 | 67 aa hypothetical protein | |||
| 15515 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr642ORF15515P | |
| 15520 | 80 aa hypothetical protein | |||
| 16275 | 64 aa hypothetical protein | |||
| 16280 | M | M.Bfr502ORF14710P (100% identity) | M.Bfr642ORF16280P | |
| 16285 | 85 aa hypothetical protein | |||
| 19635 | DUF5045 domain-containing protein | |||
| 19640 | M | M.PvuC06ORF1788P (100% identity) | M.Bfr642ORF19640P | |
| 19645 | 241 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9930 | pseudouridine synthase | |||
| 9935 | R | Bfr502ORF9250P (100% identity) | Bfr642ORF9940P | |
| 9940 | M | M.Bfr502ORF9250P (100% identity) | M.Bfr642ORF9940P | |
| 9945 | discoidin domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19080 | 122 aa hypothetical protein | |||
| 19085 | R | BfrP207GmrSDP (100% identity) | Bfr642GmrSDP | |
| 19090 | pyridoxamine 5-phosphate oxidase family | |||