Bacteroides fragilis BFG-23 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides fragilis BFG-23 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,220,880 bp
GenBank #: CP103136
REBASE acronym: Bfr23
Org_num: 61286
All begin NXY03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2020 | DUF2971 domain-containing protein | |||
| ??? | M | M.BfrGUT04ORFCP (100% identity) | M.Bfr23ORF2025P | |
| ??? | S | S.BfrBFG16ORF1985P (100% identity) | S.Bfr23ORF2025P | |
| 2050 | transposase | |||
| 8725 | helix-turn-helix transcriptional regulator | |||
| 8730 | R | Bsp163ORFCP (100% identity) | Bfr23ORF8740P | |
| 8735 | GIY-YIG nuclease family protein | |||
| 8740 | M | M.Pvu3C24ORF1473P (100% identity) | M.Bfr23ORF8740P | |
| 8745 | virulence RhuM family protein | |||
| 8750 | S | S4.Pvu3C24ORF1473P (59% identity) | S1.Bfr23ORF8740P | |
| 8755 | S | S3.Pvu3C24ORF1473P (100% identity) | S2.Bfr23ORF8740P | |
| 8760 | S | S1.Pvu3C24ORF1473P (43% identity) | S3.Bfr23ORF8740P | |
| 8765 | S | S5.Bfa467ORF12865P (75% identity) | S4.Bfr23ORF8740P | |
| 8770 | site-specific integrase | |||
| 17110 | type II toxin-antitoxin system HigB family | |||
| 17115 | R | Bfr604ORF10485P (100% identity) | Bfr23ORF17120P | |
| 17120 | M | M.Bfr89ORF10375P (100% identity) | M.Bfr23ORF17120P | |
| 17125 | S | S1.Bfr89ORF10375P (100% identity) | S1.Bfr23ORF17120P | |
| 17130 | S | S2.Bfr604ORF10485P (100% identity) | S2.Bfr23ORF17120P | |
| 17135 | tyrosine-type recombinase/integrase | |||
| 17140 | S | S2.Bfr89ORF10375P (38% identity) | S3.Bfr23ORF17120P | |
| 17145 | S | S4.Bfr604ORF10485P (62% identity) | S4.Bfr23ORF17120P | |
| 17150 | flippase-like domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6265 | AraC family transcriptional regulator | |||
| 6270 | R | Bfr435ORF6540P (100% identity) | Bfr23ORF6275P | |
| 6275 | M | M.Bfr435ORF6540P (85% identity) | M.Bfr23ORF6275P | |
| 6280 | 133 aa hypothetical protein | |||
| 9160 | 668 aa hypothetical protein | |||
| 9165 | S | S.BunT32ORF1516P (100% identity) | S.Bfr23ORF9170P | |
| 9170 | M | M.Bun13288ORFHP (99% identity) | M.Bfr23ORF9170P | |
| 9175 | C | C.BunT32ORF1516P (100% identity) | C.Bfr23ORF9170P | |
| 9180 | MotA/TolQ/ExbB proton channel family protein | |||
| 11700 | transposase | |||
| 11710 | RM | PmeBin96ORFBP (97% identity) | Bfr23ORF11710P | |
| 11715 | DNA-binding protein | |||
| 12810 | 191 aa hypothetical protein | |||
| 12815 | M | M.Bfr435ORF15020P (100% identity) | M.Bfr23ORF12815P | |
| 12820 | 60 aa hypothetical protein | |||
| 15265 | 78 aa hypothetical protein | |||
| 15270 | M | M.Bfr642ORF12495P (100% identity) | M.Bfr23ORF15270P | |
| 15275 | 161 aa hypothetical protein | |||
| 16440 | 71 aa hypothetical protein | |||
| 16445 | M | M.Bfr634ORF11595P (98% identity) | M.Bfr23ORF16445P | |
| 16450 | 82 aa hypothetical protein | |||
| 16650 | 80 aa hypothetical protein | |||
| 16655 | M | M.PmeBin12ORFDP (83% identity) | M.Bfr23ORF16655P | |
| 16660 | 135 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8685 | pseudouridine synthase | |||
| 8690 | R | Bfr89ORF8880P (99% identity) | Bfr23ORF8695P | |
| 8695 | M | M.BfrFAAORFBP (99% identity) | M.Bfr23ORF8695P | |
| 8700 | discoidin domain-containing protein | |||
| 12575 | 73 aa hypothetical protein | |||
| 12580 | R | Bun3537ORF7810P (99% identity) | Bfr23ORF12585P | |
| 12585 | M | M.Bun3537ORF7810P (100% identity) | M.Bfr23ORF12585P | |
| 12590 | site-specific integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9785 | pyridoxamine 5-phosphate oxidase family | |||
| 9790 | R | BfrP207GmrSDP (100% identity) | Bfr23GmrSDP | |
| 9805 | imidazole glycerol phosphate synthase subunit | |||