Bacteroides fragilis BFG-13 |
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Putative Bacteroides fragilis BFG-13 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,379,231 bp
GenBank #: CP103090
REBASE acronym: Bfr13
Org_num: 61280
All begin NXW51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2260 | XRE family transcriptional regulator | |||
| ??? | S | S2.BfrGUT04ORFCP (22% identity) | S.Bfr13ORF2290P | |
| 2275 | helix-turn-helix domain-containing protein | |||
| 2280 | 120 aa hypothetical protein | |||
| 2285 | DUF2971 domain-containing protein | |||
| ??? | M | M.BfrGUT04ORFCP (73% identity) | M.Bfr13ORF2290P | |
| 2300 | tyrosine recombinase | |||
| 9325 | helix-turn-helix transcriptional regulator | |||
| 9330 | R | BthC24ORF4666P (99% identity) | Bfr13ORF9340P | |
| 9335 | GIY-YIG nuclease family protein | |||
| 9340 | M | M.PmeBin229ORFBP (99% identity) | M.Bfr13ORF9340P | |
| 9345 | virulence RhuM family protein | |||
| 9350 | S | S1.Bov177ORF14070P (73% identity) | S1.Bfr13ORF9340P | |
| 9355 | S | S4.PmeBin57ORFCP (46% identity) | S2.Bfr13ORF9340P | |
| 9360 | S | S1.PmeBin57ORFCP (39% identity) | S3.Bfr13ORF9340P | |
| 9365 | S | S1.Amu16115ORF9460P (52% identity) | S4.Bfr13ORF9340P | |
| 9370 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6670 | DUF87 domain-containing protein | |||
| 6675 | M | M.BfrYORF639P (100% identity) | CAGCTG | M.Bfr13ORF6675P |
| 6680 | type IV toxin-antitoxin system AbiEi family | |||
| 9725 | Eco57I restriction-modification methylase | |||
| 9730 | RM | BxyH207ORF12360P (99% identity) | Bfr13ORF9730P | |
| 9735 | helicase-related protein | |||
| 13845 | DNA repair protein | |||
| 13850 | RM | BfrYORF1980P (100% identity) | Bfr13ORF13850P | |
| 13855 | C | C.BfrYORF1980P (100% identity) | C.Bfr13ORF13850P | |
| 13860 | DUF3408 domain-containing protein | |||
| 15925 | DUF5045 domain-containing protein | |||
| 15930 | M | M.PdiC22ORF1467P (100% identity) | M.Bfr13ORF15930P | |
| 15935 | 241 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9275 | pseudouridine synthase | |||
| 9280 | R | BfrYORF1142P (100% identity) | Bfr13ORF9285P | |
| 9285 | M | M.PmeBin12ORFEP (99% identity) | M.Bfr13ORF9285P | |
| 9290 | discoidin domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18600 | imidazole glycerol phosphate synthase subunit | |||
| 18615 | R | BfrP207GmrSDP (99% identity) | Bfr13GmrSDP | |
| 18620 | P-loop NTPase fold protein | |||