Bacteroides caccae BFG-104 |
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Putative Bacteroides caccae BFG-104 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,023,218 bp
GenBank #: CP103084
REBASE acronym: Bca104
Org_num: 61270
All begin NXW85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5745 | 182 aa hypothetical protein | |||
| 5750 | S | S4.Bca101ORF5755P (100% identity) | S4.Bca104ORF5780P | |
| 5755 | tyrosine-type recombinase/integrase | |||
| 5760 | S | S3.Bca101ORF5755P (100% identity) | S3.Bca104ORF5780P | |
| 5765 | S | S2.Bca101ORF5755P (100% identity) | S2.Bca104ORF5780P | |
| 5770 | 99 aa hypothetical protein | |||
| 5775 | S | S1.Bsp3716PORF21890P (100% identity) | S1.Bca104ORF5780P | |
| 5780 | M | M.Bca101ORF5755P (100% identity) | M.Bca104ORF5780P | |
| 5785 | R | Bsp3716PORF21890P (100% identity) | Bca104ORF5780P | |
| 5790 | C | C.Bsp3716PORF21890P (100% identity) | C.Bca104ORF5780P | |
| 5795 | 317 aa hypothetical protein | |||
| 10455 | helix-turn-helix transcriptional regulator | |||
| 10460 | R | Bth576ORF13095P (100% identity) | Bca104ORF10470P | |
| 10465 | GIY-YIG nuclease family protein | |||
| 10470 | M | M.Bth576ORF13095P (100% identity) | M.Bca104ORF10470P | |
| 10475 | virulence RhuM family protein | |||
| 10480 | S | S4.Bth576ORF13095P (58% identity) | S1.Bca104ORF10470P | |
| 10485 | S | S3.Bth576ORF13095P (100% identity) | S2.Bca104ORF10470P | |
| 10490 | 181 aa hypothetical protein | |||
| 10495 | S | S2.Bth576ORF13095P (100% identity) | S3.Bca104ORF10470P | |
| 10500 | S | S1.Bth576ORF13095P (60% identity) | S4.Bca104ORF10470P | |
| 10505 | site-specific integrase | |||
| 10930 | tyrosine-type recombinase/integrase | |||
| 10935 | S | S2.BfrIHMA4ORF11325P (71% identity) | S5.Bca104ORF10965P | |
| 10940 | S | S3.Bov299ORF13225P (100% identity) | S4.Bca104ORF10965P | |
| 10945 | S | S5.Bca101ORF10875P (41% identity) | S3.Bca104ORF10965P | |
| 10950 | S | S2.Bca101ORF10875P (99% identity) | S2.Bca104ORF10965P | |
| 10955 | 168 aa hypothetical protein | |||
| 10960 | S | S1.Bca101ORF10875P (100% identity) | S1.Bca104ORF10965P | |
| 10965 | M | M.Bca101ORF10875P (100% identity) | M.Bca104ORF10965P | |
| 10970 | R | Bca101ORF10875P (100% identity) | Bca104ORF10965P | |
| 10975 | C | C.Bun8864ORF3591P (100% identity) | C.Bca104ORF10965P | |
| 10980 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1340 | helix-turn-helix domain-containing protein | |||
| 1345 | M | M.BxyXYORF1975P (99% identity) | M.Bca104ORF1345P | |
| 1350 | phage antirepressor KilAC domain-containing | |||
| 2060 | YWFCY domain-containing protein | |||
| 2065 | M | M.BxyXYORF1485P (100% identity) | M.Bca104ORF2065P | |
| 2070 | toprim domain-containing protein | |||
| 4905 | 115 aa hypothetical protein | |||
| 4910 | M | M.Pxy11841ORFDP (100% identity) | CTSAG | M.Bca104ORF4910P |
| 4915 | HNH endonuclease | |||
| 5410 | DUF4248 domain-containing protein | |||
| 5415 | C | C.BcaH1617ORF4140P (100% identity) | C.Bca104ORF5420P | |
| 5420 | M | M.Bca43185aORF3125P (100% identity) | M.Bca104ORF5420P | |
| 5425 | BRO family protein | |||
| 5430 | R | Bca101ORF5390P (100% identity) | Bca104ORF5420P | |
| 5435 | site-specific integrase | |||
| 13905 | DUF551 domain-containing protein | |||
| 13910 | M | M.Bun3537ORF17650P (100% identity) | M.Bca104ORF13910P | |
| 13915 | DUF2829 domain-containing protein | |||
| 13960 | 139 aa hypothetical protein | |||
| 13965 | M | M.Pvu191ORF10140P (86% identity) | M.Bca104ORF13965P | |
| 13970 | 178 aa hypothetical protein | |||
| 16330 | site-specific integrase | |||
| 16335 | R | PmeBin96ORFFP (100% identity) | CCATC | Bca104ORF16340P |
| 16340 | M | M2.PmeBin96ORFFP (100% identity) | CCATC | M1.Bca104ORF16340P |
| 16345 | M | M2.Bca101ORF16230P (100% identity) | CCATC | M2.Bca104ORF16340P |
| 16350 | carbamoyl-phosphate synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10395 | DUF6078 family protein | |||
| 10400 | R | Bca101McrBP (100% identity) | Bca104McrBP | |
| 10405 | R | PmeBin96McrCP (100% identity) | Bca104McrCP | |
| 10410 | 247 aa hypothetical protein | |||