Bacteroides fragilis BFG-640 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides fragilis BFG-640 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,134,962 bp
GenBank #: CP103078
REBASE acronym: Bfr640
Org_num: 61313
All begin NXW69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1980 | DUF2971 domain-containing protein | |||
| ??? | M | M.BfrBOB25ORF19485P (100% identity) | M.Bfr640ORF1985P | |
| ??? | S | S.BfrBFG16ORF1985P (100% identity) | S.Bfr640ORF1985P | |
| 2010 | transposase | |||
| 9180 | helix-turn-helix transcriptional regulator | |||
| 9185 | R | Bth28088ORF1850P (100% identity) | Bfr640ORF9195P | |
| 9190 | DUF262 domain-containing HNH endonuclease family | |||
| 9195 | M | M.Bth28088ORF1850P (100% identity) | M.Bfr640ORF9195P | |
| 9200 | virulence RhuM family protein | |||
| 9205 | S | S1.Bov926ORF5895P (52% identity) | S1.Bfr640ORF9195P | |
| 9210 | S | S2.Bth28088ORF1850P (100% identity) | S2.Bfr640ORF9195P | |
| 9215 | S | S2.PdiC09ORF553P (100% identity) | S3.Bfr640ORF9195P | |
| 9220 | S | S4.Pdi162ORF12215P (55% identity) | S4.Bfr640ORF9195P | |
| 9225 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12460 | 67 aa hypothetical protein | |||
| 12465 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr640ORF12465P | |
| 12470 | 80 aa hypothetical protein | |||
| 15520 | 64 aa hypothetical protein | |||
| 15525 | RM | Msa17ORFEP (100% identity) | Bfr640ORF15525P | |
| 15530 | DNA-protecting protein DprA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9120 | pseudouridine synthase | |||
| 9125 | R | BfrBOB25ORF4955P (100% identity) | Bfr640ORF9130P | |
| 9130 | M | M.BfrBOB25ORF4955P (100% identity) | M.Bfr640ORF9130P | |
| 9135 | discoidin domain-containing protein | |||