Bacteroides fragilis BFG-435 |
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Putative Bacteroides fragilis BFG-435 RM systems
Ref: Tisza,M.J. et al. unpublished
REBASE ref # 35137
Complete sequence: 5,182,537 bp
GenBank #: CP103082
REBASE acronym: Bfr435
Org_num: 61291
All begin NXV32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1985 | DUF2971 domain-containing protein | |||
| ??? | M | M.BfrGUT04ORFCP (89% identity) | M.Bfr435ORF1990P | |
| ??? | S | S.BfrBFG16ORF1985P (100% identity) | S.Bfr435ORF1990P | |
| 2015 | transposase | |||
| 11045 | AAA family ATPase | |||
| ??? | C | C.BspZJ18ORF9925P (98% identity) | C.Bfr435ORF11060P | |
| 11055 | R | Bfr25606ORF13880P (99% identity) | Bfr435ORF11060P | |
| 11060 | M | M.Bsp2737ORF11960P (99% identity) | M.Bfr435ORF11060P | |
| 11065 | DNA-binding protein | |||
| 11070 | Fic family protein | |||
| 11075 | S | S2.ScoH2383ORFCP (78% identity) | S1.Bfr435ORF11060P | |
| 11080 | S | S1.PmeBin57ORFHP (57% identity) | S2.Bfr435ORF11060P | |
| 11085 | S | S1.Bsa288ORF9920P (57% identity) | S3.Bfr435ORF11060P | |
| 11090 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6525 | AraC family transcriptional regulator | |||
| ??? | R | Bfr23ORF6275P (100% identity) | Bfr435ORF6540P | |
| ??? | M | M.Bfr23ORF6275P (85% identity) | M.Bfr435ORF6540P | |
| 6550 | 133 aa hypothetical protein | |||
| 9525 | Eco57I restriction-modification methylase | |||
| 9530 | RM | BxyH207ORF12360P (100% identity) | Bfr435ORF9530P | |
| 9535 | helicase-related protein | |||
| 10035 | DUF3872 domain-containing protein | |||
| 10040 | M | M.PdiS2PDORF16400P (100% identity) | ACGCGT | M.Bfr435ORF10040P |
| 10045 | conjugal transfer protein TraO | |||
| 15015 | 60 aa hypothetical protein | |||
| 15020 | M | M.Bfr23ORF12815P (100% identity) | M.Bfr435ORF15020P | |
| 15025 | 191 aa hypothetical protein | |||
| 17750 | helix-turn-helix transcriptional regulator | |||
| 17755 | M | M.Bsp163ORFHP (100% identity) | M.Bfr435ORF17755P | |
| 17760 | R | Bsp3716PORF19155P (100% identity) | Bfr435ORF17755P | |
| 17765 | response regulator receiver domain | |||
| 17770 | V | V.Pdi113806ORF8250P (100% identity) | V.Bfr435ORF17755P | |
| 17775 | ISAs1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9055 | pseudouridine synthase | |||
| 9060 | R | Bfr23ORF8695P (99% identity) | Bfr435ORF9065P | |
| 9065 | M | M.BfrFAAORFBP (99% identity) | M.Bfr435ORF9065P | |
| 9070 | discoidin domain-containing protein | |||
| 9130 | DUF4391 domain-containing protein | |||
| 9135 | M | M.PmeBin8ORFCP (95% identity) | M.Bfr435ORF9135P | |
| 9140 | virulence RhuM family protein | |||
| 9145 | R | PmeBin8ORFCP (95% identity) | Bfr435ORF9135P | |
| 9150 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17930 | imidazole glycerol phosphate synthase subunit | |||
| 17945 | R | BfrP207GmrSDP (100% identity) | Bfr435GmrSDP | |
| 17950 | pyridoxamine 5-phosphate oxidase family | |||