Escherichia coli SCAID WND1-2022 (119) |
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Putative Escherichia coli SCAID WND1-2022 (119) RM systems
Ref: Korotetskiy,I. et al. unpublished
REBASE ref # 35193
| Sequence length: | GenBank #: | |
| Chromosome: | 5,032,780 bp | CP102947 |
| plasmid unnamed1: | 105,437 bp | CP102948 |
| plasmid unnamed2: | 99,647 bp | CP102949 |
REBASE acronym: Ecos119
Org_num: 61566
All begin NW339_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18720 | type IV toxin-antitoxin system AbiEi family | |||
| 18725 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Ecos119ORF18730P |
| 18730 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Ecos119ORF18730P |
| 18735 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Ecos119ORF18730P |
| 18740 | ash family protein | |||
| 20540 | restriction endonuclease | |||
| 20545 | M | M.EcosS9ORF3165P (100% identity) | M.Ecos119ORF20545P | |
| 20550 | S | S.EcosS9ORF3165P (54% identity) | CACNNNNGTAY | S1.Ecos119ORF20545P |
| 20555 | IS1 family transposase | |||
| 20560 | S | S2.EcoSME98ORF9230P (100% identity) | S2.Ecos119ORF20545P | |
| 20565 | R | EcosS9ORF3165P (100% identity) | Ecos119ORF20545P | |
| 20570 | endoribonuclease SymE | |||
| 22535 | IS3-like element ISSen4 family transposase | |||
| 22540 | R | EcotcmA3ORF16550P (100% identity) | Ecos119ORF22560P | |
| 22545 | DNA-protecting protein DprA | |||
| 22550 | RecQ family ATP-dependent DNA helicase | |||
| 22555 | S | S.EcotcmA3ORF16550P (100% identity) | S.Ecos119ORF22560P | |
| 22560 | M | M.Pre393ORF2750P (100% identity) | M.Ecos119ORF22560P | |
| 22565 | helix-turn-helix domain-containing protein | |||
| plasmid unnamed1 | ||||
| 25140 | type II toxin-antitoxin system Phd/YefM family | |||
| 25145 | M | M.SflFF34ORF9300P (80% identity) | M.Ecos119ORF25145P | |
| 25150 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecos119DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecos119ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 9630 | phosphohydrolase | |||
| 9635 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecos119DcmP |
| 9640 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecos119DcmP |
| 9645 | drug/metabolite exporter YedA | |||
| 13190 | DUF3927 family protein | |||
| 13205 | M | M.EcosS9ORF10680P (100% identity) | A | M.Ecos119ORF13205P |
| 13210 | TrmB family transcriptional regulator | |||
| 15475 | helix-turn-helix domain-containing protein | |||
| 15480 | M | M.KpnYN1ORFGP (89% identity) | M.Ecos119ORF15480P | |
| 15485 | 71 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 25200 | 103 aa hypothetical protein | |||
| 25205 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Ecos119ORF25205P |
| 25210 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25770 | tellurite/colicin resistance protein | |||
| 25785 | M | M.Eco0329ORF25850P (100% identity) | M.Ecos119ORF25785P | |
| 25790 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20535 | BrnT family toxin | |||
| 20540 | R | EcosS9MrrP (100% identity) | Ecos119MrrP | |
| 20545 | type I restriction-modification system subunit | |||
| 20775 | glycosyltransferase | |||
| 20780 | R | EcosS3McrBP (100% identity) | Ecos119McrBP | |
| 20785 | R | EcosS9McrCP (100% identity) | Ecos119McrCP | |
| 20790 | Alw26I/Eco31I/Esp3I family type II restriction | |||