Limosilactobacillus fermentum PCC |
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Putative Limosilactobacillus fermentum PCC RM systems
Ref: Jensen,K. et al. unpublished
REBASE ref # 35074
Complete sequence: 2,233,760 bp
GenBank #: CP102532
REBASE acronym: LfePCC
Org_num: 61110
All begin NUU04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9090 | 76 aa hypothetical protein | |||
| 9095 | R | Lfe8312ORFCP (100% identity) | LfePCCORF9125P | |
| 9100 | IS30 family transposase | |||
| 9105 | S | S3.Lfe8633ORFDP (94% identity) | S3.LfePCCORF9125P | |
| 9110 | S | S2.Lfe8633ORFDP (100% identity) | S2.LfePCCORF9125P | |
| 9115 | tyrosine-type recombinase/integrase | |||
| 9120 | S | S1.Lfe8633ORFDP (100% identity) | S1.LfePCCORF9125P | |
| 9125 | M | M.Lfe8633ORFDP (100% identity) | M.LfePCCORF9125P | |
| 9130 | C | C.LfeU21ORF8450P (100% identity) | C.LfePCCORF9125P | |
| 9135 | 298 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2215 | BREX system P-loop protein BrxC | |||
| 2220 | RM | Lfe8633ORFEP (100% identity) | LfePCCORF2220P | |
| 2225 | site-specific integrase | |||
| 2225 | site-specific integrase | |||
| 2230 | RM | Lfe8633ORFFP (100% identity) | LfePCCORF2230P | |
| 2235 | BREX-1 system phosphatase PglZ type A | |||
| 9205 | P27 family phage terminase small subunit | |||
| 9210 | M | M.Lfe8633ORFBP (93% identity) | M.LfePCCORF9210AP | |
| 9215 | IS3 family transposase | |||
| 9220 | transposase | |||
| ??? | M | M.Lfe8633ORFCP (100% identity) | M.LfePCCORF9210BP | |
| 9230 | 206 aa hypothetical protein | |||