Salmonella enterica s12177 |
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Putative Salmonella enterica s12177 RM systems
Ref: Du,P. et al. mSystems, e0025322 (2022) In press
REBASE ref # 35096
| Sequence length: | GenBank #: | |
| Chromosome: | 4,672,242 bp | CP101348 |
| plasmid ps12177_3: | 6,716 bp | CP101350 |
| plasmid ps12177-CTX: | 200,106 bp | CP101349 |
REBASE acronym: Sen12177
Org_num: 61145
All begin NMV06_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen12177DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen12177ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 9090 | phosphohydrolase | |||
| 9095 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen12177DcmP |
| 9100 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.Sen12177DcmP |
| 9105 | drug/metabolite exporter YedA | |||
| 19290 | YebC/PmpR family DNA-binding transcriptional | |||
| 19295 | R | Sensp14178ORF19855P (100% identity) | Sen12177ORF19295P | |
| 19300 | DUF2220 domain-containing protein | |||
| 19335 | TnsA endonuclease N-terminal domain-containing | |||
| 19340 | R | SenV2ORF20065P (100% identity) | Sen12177ORF19340P | |
| 19345 | malate transporter | |||
| plasmid ps12177_3 | ||||
| 23515 | 127 aa hypothetical protein | |||
| 23520 | R | Eco46323ORFDP (100% identity) | GRCGYC | Sen12177ORF23525P |
| 23525 | M | M.Sen64991ORFAP (100% identity) | GRCGYC | M.Sen12177ORF23525P |
| plasmid ps12177-CTX | ||||
| 23105 | 55 aa hypothetical protein | |||
| 23110 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen12177ORF23110P |
| 23115 | thermonuclease family protein | |||
| 23455 | DNA-binding protein | |||
| 23460 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen12177ORF23460P |
| 23465 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17010 | small effector SsaA | |||
| 17015 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sen12177ORF17020P |
| 17020 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.Sen12177ORF17020P |
| 17025 | MFS transporter | |||