Pimelobacter simplex N39 |
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Putative Pimelobacter simplex N39 RM systems
Ref: Yan,L. et al. Microorganisms 10 (8), 1496 (2022)
REBASE ref # 35093
| Sequence length: | GenBank #: | |
| Chromosome: | 6,092,424 bp | CP097984 |
| plasmid pA-N39: | 110,939 bp | CP097985 |
| plasmid pB-N39: | 61,745 bp | CP097986 |
REBASE acronym: PsiN39
Org_num: 61126
All begin M0M43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5725 | CHAT domain-containing protein | |||
| 5730 | M | M1.PsiN40ORF24235P (100% identity) | M1.PsiN39ORF5730P | |
| 5735 | M | M2.PsiN40ORF24235P (100% identity) | M2.PsiN39ORF5730P | |
| 5740 | S | S.PsiN40ORF24235P (100% identity) | S.PsiN39ORF5730P | |
| 5745 | R | PsiN40ORF24235P (100% identity) | PsiN39ORF5730P | |
| 5750 | IS256 family transposase | |||
| 23505 | CHAT domain-containing protein | |||
| 23510 | M | M1.PsiN40ORF24235P (100% identity) | M1.PsiN39ORF23510P | |
| 23515 | M | M2.PsiN40ORF24235P (100% identity) | M2.PsiN39ORF23510P | |
| 23520 | S | S.PsiN40ORF24235P (100% identity) | S.PsiN39ORF23510P | |
| 23525 | R | PsiN40ORF24235P (100% identity) | PsiN39ORF23510P | |
| 23530 | TnsA-like heteromeric transposase endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5895 | 64 aa hypothetical protein | |||
| 5900 | M | M.PsiN40ORF24405P (100% identity) | M.PsiN39ORF5900P | |
| 5905 | thermonuclease family protein | |||
| 12420 | sigma-70 family RNA polymerase sigma factor | |||
| 12425 | M | M.PsiN40ORF1055P (100% identity) | M.PsiN39ORF12425P | |
| 12430 | 107 aa hypothetical protein | |||
| 18805 | 75 aa hypothetical protein | |||
| 18815 | R | PsiN40ORF7470P (100% identity) | PsiN39ORF18820P | |
| 18820 | M | M.PsiN40ORF7470P (100% identity) | M.PsiN39ORF18820P | |
| 18825 | Swt1 family HEPN domain-containing protein | |||
| 21810 | YfdQ family protein | |||
| 21815 | M | M.PsiN40ORF10460P (100% identity) | M.PsiN39ORF21815P | |
| 21820 | DEAD/DEAH box helicase | |||
| 21820 | DEAD/DEAH box helicase | |||
| 21825 | M | M.PsiN40ORF10470P (100% identity) | M.PsiN39ORF21825P | |
| 21830 | 142 aa hypothetical protein | |||
| 22235 | RusA family crossover junction | |||
| 22240 | M | M.PsiN40ORF10885P (100% identity) | M.PsiN39ORF22240P | |
| 22245 | 442 aa hypothetical protein | |||
| plasmid pA-N39 | ||||
| 30430 | 712 aa hypothetical protein | |||
| 30435 | M | M.PsiN40ORF30455P (100% identity) | M.PsiN39ORF30435P | |
| 30440 | 293 aa hypothetical protein | |||
| plasmid pB-N39 | ||||
| 30600 | 136 aa hypothetical protein | |||
| 30605 | M | M.PsiN40ORF30625P (100% identity) | M.PsiN39ORF30605P | |
| 30610 | 46 aa hypothetical protein | |||