Clostridioides difficile isolate Clostridioides difficile |
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Putative Clostridioides difficile isolate Clostridioides difficile RM systems
Ref:
REBASE ref # 35089
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,108,918 bp | OX244046 |
| chromosome 1: | 4,169,505 bp | OX246690 |
| chromosome 1: | 4,424,808 bp | OX246694 |
REBASE acronym:
Org_num:
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | Cdi21303IIP (97% identity) | Cdi1BORFBP | |
| ??? | S | S.CdiNT64ORF17725P (59% identity) | S.Cdi1BORFBP | |
| ??? | M | M.PdiBJ08ORFBP (97% identity) | M.Cdi1BORFBP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.Cac8I (70% identity) | M.Cdi1AORFBP | |
| chromosome 1 | ||||
| ??? | M | M.Cdi1AORFAP (93% identity) | M.Cdi1CORFBP | |
| ??? | M | M.Csp10701ORF15580P (100% identity) | M.Cdi1CORFCP | |
| ??? | RM | Csp10701ORF15580P (100% identity) | Cdi1CORFCP | |
| chromosome 1 | ||||
| ??? | M | M.Cdi1AORFAP (99% identity) | CAAAAA | M.Cdi1BORFCP |
| ??? | DNA phosphorothioation system sulfurtransferase DndC | |||
| ??? | M | M.CdiST42DndDP (98% identity) | M.Cdi1BDndDP | |
| ??? | DNA sulfur modification protein DndE | |||
| ??? | M | M.CdiST42DndCP (99% identity) | M.Cdi1BDndCP | |
| ??? | AAA family ATPase | |||
| ??? | AAA family ATPase | |||
| ??? | M | M.CdiCd24DndEP (96% identity) | M.Cdi1BDndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | DNA sulfur modification protein DndE | |||
| ??? | R | CdiST42DptHP (70% identity) | Cdi1BDptHP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| ??? | R | CdiST42DptGP (62% identity) | Cdi1BDptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptF | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptG | |||
| ??? | R | CdiST42DptFP (67% identity) | Cdi1BDptFP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | Cdi1BMcrCP (99% identity) | Cdi1AMcrCP | |
| ??? | R | Cdi1BMcrBP (99% identity) | Cdi1AMcrBP | |
| chromosome 1 | ||||
| ??? | R | Csp5401McrCP (94% identity) | Cdi1CMcrCP | |
| ??? | R | Cdi1AMcrBP (88% identity) | Cdi1CMcrBP | |
| chromosome 1 | ||||
| ??? | R | Cdi1AMcrCP (99% identity) | Cdi1BMcrCP | |
| ??? | R | Cdi1AMcrBP (99% identity) | Cdi1BMcrBP | |
| ??? | R | CdiNT64GmrSDP (95% identity) | Cdi1BGmrSDP | |