Clostridium perfringens JXNC-J1 |
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Putative Clostridium perfringens JXNC-J1 RM systems
Ref: Yang,B. unpublished
REBASE ref # 35030
| Sequence length: | GenBank #: | |
| Chromosome: | 3,223,947 bp | CP102420 |
| plasmid unnamed1: | 46,509 bp | CP102421 |
REBASE acronym: CpeJ1
Org_num: 61090
All begin NQ197_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7350 | SH3 domain-containing protein | |||
| 7355 | R | Cpe62ORF7430P (99% identity) | CpeJ1ORF7365P | |
| 7360 | S | S.CpeB4ORFCP (100% identity) | S.CpeJ1ORF7365P | |
| 7365 | M | M.CpeB4ORFCP (100% identity) | M.CpeJ1ORF7365P | |
| 7370 | HNH endonuclease | |||
| 7540 | 98 aa hypothetical protein | |||
| 7545 | M | M.CpeB4ORFGP (98% identity) | M.CpeJ1ORF7545P | |
| 7550 | R | CpeB4ORFGP (100% identity) | CpeJ1ORF7545P | |
| 7555 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4925 | 160 aa hypothetical protein | |||
| 4930 | M | M.CpeB4ORFDP (95% identity) | M.CpeJ1ORF4930P | |
| 4935 | DUF4065 domain-containing protein | |||
| 14335 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14340 | M | M.CpeQHY2ORF14995P (100% identity) | GTATAC | M.CpeJ1ORF14340P |
| 14345 | YhgE/Pip domain-containing protein | |||
| plasmid unnamed1 | ||||
| 14925 | DUF4236 domain-containing protein | |||
| 14930 | M | M.CpeS10ORF15060P (100% identity) | M.CpeJ1ORF14930P | |
| 14935 | 94 aa hypothetical protein | |||
| 15005 | 101 aa hypothetical protein | |||
| 15010 | M | M.CpeB4ORFEP (100% identity) | M.CpeJ1ORF15010P | |
| 15015 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5010 | 103 aa hypothetical protein | |||
| 5015 | R | CpeB4McrBP (100% identity) | CpeJ1McrBP | |
| 5020 | R | CpeB4McrCP (100% identity) | CpeJ1McrCP | |
| 5025 | SdpI family protein | |||
| 5140 | ribosomal protein L7/L12 | |||
| 5145 | R | Cpe30ORF8040P (99% identity) | CpeJ1ORF5145P | |
| 5150 | 1209 aa hypothetical protein | |||