Escherichia coli PD7 |
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Putative Escherichia coli PD7 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,696,020 bp | CP074047 |
| plasmid pYLPD7a: | 218,006 bp | CP074048 |
| plasmid pYLPD7b: | 102,246 bp | CP074049 |
REBASE acronym: EcoPD7
Org_num: 60941
All begin KFU78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8960 | 388 aa hypothetical protein | |||
| 8965 | M | M.Eho50EhORF13780P (100% identity) | M.EcoPD7ORF8965P | |
| 8970 | S | S.EcoE35ORF9255P (100% identity) | S.EcoPD7ORF8965P | |
| 8975 | R | EcoE35ORF9255P (100% identity) | EcoPD7ORF8965P | |
| 8980 | M48 family metallopeptidase | |||
| 17240 | helix-turn-helix domain-containing protein | |||
| 17245 | M | M.RorBL06ORF60180P (100% identity) | M.EcoPD7ORF17245P | |
| 17250 | S | S.Eho66ORF4700P (100% identity) | S.EcoPD7ORF17245P | |
| 17255 | DUF4268 domain-containing protein | |||
| 17260 | R | Eho66ORF4700P (100% identity) | EcoPD7ORF17245P | |
| 17265 | HigA family addiction module antidote protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1595 | cell division protein DamX | |||
| 1600 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPD7DamP |
| 1605 | ribulose-phosphate 3-epimerase | |||
| 8640 | phosphohydrolase | |||
| 8645 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoPD7DcmP |
| 8650 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoPD7DcmP |
| 8655 | drug/metabolite exporter YedA | |||
| 17045 | phage holin, lambda family | |||
| 17050 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoPD7ORF17050P | |
| 17055 | 67 aa hypothetical protein | |||
| 19500 | HNH endonuclease | |||
| 19505 | R | EcoPSS04ORF37280P (100% identity) | EcoPD7ORF19505P | |
| 19510 | 332 aa hypothetical protein | |||
| 20805 | phage holin, lambda family | |||
| 20810 | M | M.Sen18578ORF17020P (99% identity) | M.EcoPD7ORF20810P | |
| 20815 | TrmB family transcriptional regulator | |||
| plasmid pYLPD7a | ||||
| 23280 | thermonuclease family protein | |||
| 23285 | M | M.Sens770ORF21675P (100% identity) | M.EcoPD7ORF23285P | |
| 23290 | 56 aa hypothetical protein | |||
| 23775 | DNA-binding protein | |||
| 23780 | M | M.Ype21801ORF197P (100% identity) | M.EcoPD7ORF23780P | |
| 23785 | 273 aa hypothetical protein | |||
| plasmid pYLPD7b | ||||
| 24270 | RM | Fnu048ORFEP (94% identity) | EcoPD7ORF24270P | |
| 24275 | DEAD/DEAH box helicase | |||