Escherichia coli PK12 |
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Putative Escherichia coli PK12 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
Complete sequence: 5,005,235 bp
GenBank #: CP074031
REBASE acronym: EcoPK12
Org_num: 60946
All begin KFU67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20850 | N-6 DNA methylase | |||
| 20855 | R | EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | EcoPK12ORF20865P |
| 20860 | S | S.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | S.EcoPK12ORF20865P |
| 20865 | M | M2.SflLIN11ORF19980P (99% identity) | CCCNNNNNGTG | M2.EcoPK12ORF20865P |
| 20870 | M | M1.EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | M1.EcoPK12ORF20865P |
| 20875 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2175 | cell division protein DamX | |||
| 2180 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPK12DamP |
| 2185 | ribulose-phosphate 3-epimerase | |||
| 2705 | DUF2556 family protein | |||
| 2710 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoPK12ORF2710P |
| 2715 | DNA-binding transcriptional regulator Fis | |||
| 7490 | recombination protein NinB | |||
| 7495 | M | M.EcoPK12ORF18945P (100% identity) | M.EcoPK12ORF7495P | |
| 7500 | NinE family protein | |||
| 14085 | drug/metabolite exporter YedA | |||
| 14090 | V | V.EcoWW2DcmP (100% identity) | V.EcoPK12DcmP | |
| 14095 | M | M.EcoWW2DcmP (100% identity) | CCWGG | M.EcoPK12DcmP |
| 14100 | phosphohydrolase | |||
| 18940 | NinE family protein | |||
| 18945 | M | M.EcoPK12ORF7495P (100% identity) | M.EcoPK12ORF18945P | |
| 18950 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20650 | BrnT family toxin | |||
| 20655 | R | EcoSTEFF1MrrP (100% identity) | EcoPK12MrrP | |
| 20660 | SAM-dependent DNA methyltransferase | |||