Escherichia coli MB64 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MB64 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,781,577 bp | CP073929 |
| plasmid pYLMB64a: | 112,470 bp | CP073930 |
REBASE acronym: EcoMB64
Org_num: 60934
All begin KFU91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9260 | IS1 family transposase | |||
| 9265 | M | M.EcoPD4ORF10815P (100% identity) | M.EcoMB64ORF9265P | |
| 9270 | S | S.EcoPD4ORF10815P (100% identity) | S.EcoMB64ORF9265P | |
| 9275 | YecA family protein | |||
| 9280 | R | EcoP44ORFDP (100% identity) | EcoMB64ORF9265P | |
| 9285 | M48 family metallopeptidase | |||
| plasmid pYLMB64a | ||||
| 23095 | type II toxin-antitoxin system Phd/YefM family | |||
| 23100 | M | M.EcoRL21ORF23455P (100% identity) | M.EcoMB64ORF23100P | |
| 23105 | S | S.EcoRL21ORF23455P (100% identity) | S.EcoMB64ORF23100P | |
| 23110 | R | EcoRL21ORF23455P (100% identity) | EcoMB64ORF23100P | |
| 23115 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMB64DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoMB64ORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 8975 | phosphohydrolase | |||
| 8980 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoMB64DcmP |
| 8985 | V | V.EcosPA11DcmP (100% identity) | V.EcoMB64DcmP | |
| 8990 | drug/metabolite exporter YedA | |||
| plasmid pYLMB64a | ||||
| 22775 | IS4-like element IS421 family transposase | |||
| 22780 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoMB64ORF22780P |
| 22785 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6180 | DUF4391 domain-containing protein | |||
| 6185 | M | M.Eco9032II (98% identity) | GAAACC | M.EcoMB64ORF6185P |
| 6190 | R | Eco9032IIP (100% identity) | GAAACC | EcoMB64ORF6185P |
| 6195 | DUF5384 family protein | |||