Streptococcus suis DNS11 |
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Putative Streptococcus suis DNS11 RM systems
Ref: Fredriksen,S. unpublished
REBASE ref # 34885
Complete sequence: 2,165,246 bp
GenBank #: CP102152
REBASE acronym: SsuDNS11
Org_num: 61019
All begin NQZ88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3460 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 3465 | R | SsuNLS50ORF3680P (100% identity) | SsuDNS11ORF3470P | |
| 3470 | M | M.SsuWTORFAP (100% identity) | M.SsuDNS11ORF3470P | |
| 3475 | S | S1.SsuWTORFAP (100% identity) | S1.SsuDNS11ORF3470P | |
| 3480 | S | S2.SsuWTORFAP (100% identity) | CCAANNNNNNTTC | S2.SsuDNS11ORF3470P |
| 3485 | ribose-5-phosphate isomerase RpiA | |||
| 4380 | FAD-containing oxidoreductase | |||
| 4385 | R | SsuiS10ORFCP (22% identity) | CCAANNNNNNTTC | SsuDNS11ORF4410AP |
| 4390 | IS200/IS605 family transposase | |||
| 4395 | R | SsuiS10ORFCP (47% identity) | CCAANNNNNNTTC | SsuDNS11ORF4410BP |
| 4400 | IS110 family transposase | |||
| 4405 | R | SsuSs109ORF1830BP (93% identity) | CCAANNNNNNTTC | SsuDNS11ORF4410CP |
| 4410 | M | M.SsuSs109ORF1830P (100% identity) | CCAANNNNNNTTC | M.SsuDNS11ORF4410P |
| 4415 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsuDNS11ORF4410P |
| 4420 | 310 aa hypothetical protein | |||
| 8655 | serine--tRNA ligase | |||
| 8660 | M | M.SsuWTORFDP (100% identity) | M.SsuDNS11ORF8660P | |
| 8665 | S | S.SsuiS10ORFAP (50% identity) | S1.SsuDNS11ORF8660P | |
| 8670 | R | SsuNLS50ORF9390P (99% identity) | SsuDNS11ORF8660P | |
| 8675 | S | S2.SsuT15ORF9320P (95% identity) | S2.SsuDNS11ORF8660P | |
| 8680 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4700 | GTP pyrophosphokinase | |||
| 4705 | RM | SsuSs109ORF2140P (100% identity) | SsuDNS11ORF4705P | |
| 4710 | S | S.SsuSs109ORF2140P (100% identity) | S.SsuDNS11ORF4705P | |
| 4715 | 261 aa hypothetical protein | |||
| 5690 | 142 aa hypothetical protein | |||
| 5695 | M | M.SsuNLS50ORF6180P (100% identity) | M.SsuDNS11ORF5695P | |
| 5700 | replication initiator protein A | |||
| 7960 | 120 aa hypothetical protein | |||
| 7965 | R | SsuSs109ORF5445P (100% identity) | SsuDNS11ORF7970P | |
| 7970 | M | M.SsuWTORFFP (98% identity) | M.SsuDNS11ORF7970P | |
| 7975 | valine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5160 | 262 aa hypothetical protein | |||
| 5165 | R | SsuWTMcrBP (100% identity) | SsuDNS11McrBP | |
| 5170 | R | SsuSs46McrCP (100% identity) | SsuDNS11McrCP | |
| 5175 | glutamine-hydrolyzing GMP synthase | |||