Escherichia coli Seattle 1946 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Seattle 1946 RM systems
Ref: Wan,K.H. et al. unpublished
REBASE ref # 35011
| Sequence length: | GenBank #: | |
| Chromosome: | 5,132,220 bp | CP101925 |
| plasmid pEcFELIX377.1: | 48,488 bp | CP101926 |
REBASE acronym: Eco1946
Org_num: 60842
All begin NP429_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20960 | restriction endonuclease | |||
| 20965 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco1946ORF20965P |
| 20970 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco1946ORF20965P |
| 20975 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco1946ORF20965P |
| 20980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1946DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2400 | DUF2556 family protein | |||
| 2405 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1946ORF2405P |
| 2410 | DNA-binding transcriptional regulator Fis | |||
| 9810 | phosphohydrolase | |||
| 9815 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1946DcmP |
| 9820 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco1946DcmP |
| 9825 | drug/metabolite exporter YedA | |||
| plasmid pEcFELIX377.1 | ||||
| 24870 | 89 aa hypothetical protein | |||
| 24875 | M | M.EcoZLWTORF24570P (100% identity) | GATC | M.Eco1946ORF24875P |
| 24885 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20955 | BrnT family toxin | |||
| 20960 | R | Ecou021MrrP (100% identity) | Eco1946MrrP | |
| 20965 | type I restriction-modification system subunit | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14005 | NinE family protein | |||
| 14010 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1946ORF14010P |
| 14015 | recombination protein NinB | |||