Xanthomonas oryzae pv. oryzae YNCX |
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Putative Xanthomonas oryzae pv. oryzae YNCX RM systems
Ref: Aa,X. et al. unpublished
REBASE ref # 35001
| Sequence length: | GenBank #: | |
| Chromosome: | 4,978,095 bp | CP101847 |
| plasmid pYNCX3: | 14,648 bp | CP101850 |
| plasmid pYNCX6: | 46,560 bp | CP101853 |
REBASE acronym: XorYNCX
Org_num: 60778
All begin NO935_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16380 | 88 aa hypothetical protein | |||
| 16385 | R | Xor685ORF18625P (99% identity) | XorYNCXORF16410P | |
| 16390 | 224 aa hypothetical protein | |||
| 16395 | abortive infection family protein | |||
| 16400 | S | S.XorKORF3457P (97% identity) | S.XorYNCXORF16410P | |
| 16405 | nucleotidyltransferase substrate binding | |||
| 16410 | M | M.XorZ173ORF6425P (100% identity) | M.XorYNCXORF16410P | |
| 16415 | restriction endonuclease | |||
| 16425 | 87 aa hypothetical protein | |||
| 16430 | R | Xor233ORF7585P (99% identity) | XorYNCXORF16440P | |
| 16435 | Abi family protein | |||
| 16440 | M | M.XorCIATORF17140P (99% identity) | M.XorYNCXORF16440P | |
| 16445 | S | S1.XorHGA4ORFCP (39% identity) | S1.XorYNCXORF16440P | |
| 16450 | IS5-like element ISXo1 family transposase | |||
| 16455 | S | S.XorUg11ORF5815P (33% identity) | S2.XorYNCXORF16440P | |
| 16460 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6540 | IS5 family transposase | |||
| 6545 | M | M.Xor99AgORF6590P (98% identity) | CGGCCG | M.XorYNCXORF6545P |
| 6550 | R | Xor79ORF6965P (100% identity) | CGGCCG | XorYNCXORF6545P |
| 6555 | ISL3 family transposase | |||
| plasmid pYNCX3 | ||||
| 23310 | 131 aa hypothetical protein | |||
| 23315 | M | M.OmeME102ORF1666P (8% identity) | M.XorYNCXORF23315BP | |
| 23320 | M | M.Msp72103ORF10005P (22% identity) | M.XorYNCXORF23315AP | |
| 23325 | R | Cdi1505ORF20007P (39% identity) | XorYNCXORF23315P | |
| 23330 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2685 | alpha/beta fold hydrolase | |||
| 2690 | R | XorYN24ORF9770P (99% identity) | XorYNCXORF2695P | |
| ??? | M | M.Xor4509ORF2855P (91% identity) | M.XorYNCXORF2695P | |
| 2710 | Fic family protein | |||
| plasmid pYNCX6 | ||||
| 23855 | 124 aa hypothetical protein | |||
| 23860 | M | M.LpaMT01ORF9995P (100% identity) | M.XorYNCXORF23860P | |
| 23865 | R | LpaMT01ORF9995P (100% identity) | XorYNCXORF23860P | |
| 23870 | 70 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16410 | type I restriction-modification system subunit | |||
| 16415 | R | XorZ173MrrP (100% identity) | XorYNCXMrrP | |
| 16420 | type II toxin-antitoxin system RelE/ParE family | |||