Escherichia coli STEC1084 |
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Putative Escherichia coli STEC1084 RM systems
Ref: Yang,X. unpublished
REBASE ref # 28117
| Sequence length: | GenBank #: | |
| Chromosome: | 4,706,417 bp | CP101971 |
| plasmid unnamed1: | 311,332 bp | CP101972 |
| plasmid unnamed2: | 65,700 bp | CP101973 |
| plasmid unnamed3: | 82,352 bp | CP101974 |
REBASE acronym: Eco1084
Org_num: 60722
All begin NQB72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19595 | 322 aa hypothetical protein | |||
| 19600 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco1084ORF19605P |
| 19605 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco1084ORF19605P |
| 19610 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco1084ORF19605P |
| 19615 | endoribonuclease SymE | |||
| 19820 | 128 aa hypothetical protein | |||
| 19825 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.Eco1084ORF19825P |
| 19830 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco1084ORF19825P |
| 19835 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1084DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1084ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 7675 | recombination protein NinB | |||
| 7680 | M | M.EcoC711ORF7860P (100% identity) | GATC | M.Eco1084ORF7680P |
| 7685 | NinE family protein | |||
| 10040 | phosphohydrolase | |||
| 10045 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1084DcmP |
| 10050 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1084DcmP |
| 10055 | drug/metabolite exporter YedA | |||
| 15400 | NinE family protein | |||
| 15405 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco1084ORF15405P |
| 15410 | recombination protein NinB | |||
| 19800 | HNH endonuclease | |||
| 19805 | R | SflN101ORF11875P (100% identity) | Eco1084ORF19805P | |
| 19810 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 22865 | tellurite/colicin resistance protein | |||
| 22880 | M | M.EcoSTEC1025ORF10405P (100% identity) | M.Eco1084ORF22880P | |
| 22885 | TrmB family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 24640 | 102 aa hypothetical protein | |||
| 24645 | M | M.Kpn1026ORFJP (100% identity) | M.Eco1084ORF24645P | |
| 24650 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 25170 | 73 aa hypothetical protein | |||
| 25175 | M | M.SflN92ORF24820P (100% identity) | M.Eco1084ORF25175P | |
| 25180 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19615 | endoribonuclease SymE | |||
| 19620 | R | Ecos673GmrDP (100% identity) | Eco1084GmrDP | |
| 19625 | R | SflN101GmrSP (100% identity) | Eco1084GmrSP | |
| 19630 | cytoplasmic protein | |||
| 19805 | HNH endonuclease | |||
| 19810 | R | SflN101McrBP (100% identity) | Eco1084McrBP | |
| 19815 | R | SflN101McrCP (100% identity) | Eco1084McrCP | |
| 19820 | 128 aa hypothetical protein | |||