Escherichia coli CPWW_CT |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CPWW_CT RM systems
Ref: Khine,N.O. unpublished
REBASE ref # 34983
| Sequence length: | GenBank #: | |
| Chromosome: | 4,785,994 bp | CP076575 |
| plasmid pCPWWCT.1: | 92,649 bp | CP076577 |
| plasmid pCPWWCT-p0111: | 96,110 bp | CP076576 |
REBASE acronym: EcoWCT
Org_num: 60717
All begin KQH66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3490 | IS5-like element ISKpn26 family transposase | |||
| 3495 | R | EcoVEF5ORF6590P (99% identity) | EcoWCTORF3505P | |
| 3500 | S | S.EcoVEF5ORF6590P (100% identity) | S.EcoWCTORF3505P | |
| 3505 | M | M.EcoVEF5ORF6590P (100% identity) | M.EcoWCTORF3505P | |
| 3510 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1865 | cell division protein DamX | |||
| 1870 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoWCTDamP |
| 1875 | ribulose-phosphate 3-epimerase | |||
| 2400 | DUF2556 family protein | |||
| 2405 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.EcoWCTORF2405P |
| 2410 | DNA-binding transcriptional regulator Fis | |||
| 9305 | phosphohydrolase | |||
| 9310 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoWCTDcmP |
| 9315 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoWCTDcmP |
| 9320 | drug/metabolite exporter YedA | |||
| 14995 | replication endonuclease | |||
| 15000 | M | M.Eco2452ORFDP (100% identity) | GATC | M.EcoWCTORF15000P |
| 15005 | TraR/DksA family transcriptional regulator | |||
| 19365 | phage lysis protein EssD | |||
| 19370 | M | M.Sso63633ORF22290P (100% identity) | M.EcoWCTORF19370P | |
| 19375 | 67 aa hypothetical protein | |||
| 19405 | LexA family transcriptional regulator | |||
| 19410 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoWCTORF19410P |
| 19415 | PerC family transcriptional regulator | |||
| 19975 | HNH endonuclease | |||
| 19980 | R | EcoPSJ36ORF38650P (100% identity) | EcoWCTORF19980P | |
| 19985 | 332 aa hypothetical protein | |||
| plasmid pCPWWCT.1 | ||||
| 23690 | 101 aa hypothetical protein | |||
| 23695 | M | M.SflFF3ORF25360P (100% identity) | SAY | M.EcoWCTORF23695P |
| 23700 | 73 aa hypothetical protein | |||
| plasmid pCPWWCT-p0111 | ||||
| 23140 | recombination-associated protein RdgC | |||
| 23145 | M | M.Sen94620ORF28085P (100% identity) | M.EcoWCTORF23145P | |
| 23160 | SPFH/Band 7/PHB domain protein | |||