Mycoplasmopsis caviae G122 |
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Putative Mycoplasmopsis caviae G122 RM systems
Ref: Spergser,J. unpublished
REBASE ref # 27781
Complete sequence: 1,155,014 bp
GenBank #: CP101806
REBASE acronym: McaG122
Org_num: 60750
All begin NPA07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4660 | restriction endonuclease subunit S | |||
| 4665 | S | S4.MsuTBORF1390P (18% identity) | S.McaG122ORF4675P | |
| 4670 | restriction endonuclease subunit S | |||
| 4675 | M | M.Mca10126ORF602P (100% identity) | M.McaG122ORF4675P | |
| 4680 | R | Mca10126ORF602P (100% identity) | McaG122ORF4675P | |
| 4685 | 161 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 125 | HNH endonuclease | |||
| ??? | M | M.Mca10126ORF429P (100% identity) | M.McaG122ORF130P | |
| 140 | NAD+ synthase | |||
| 225 | phosphoketolase family protein | |||
| ??? | M | M.Mca10126ORF416P (100% identity) | M.McaG122ORF230P | |
| 250 | 177 aa hypothetical protein | |||
| 295 | 30S ribosomal protein S16 | |||
| 300 | R | Mca10126IP (100% identity) | McaG122ORF305P | |
| 305 | M | M.Mca10126I (78% identity) | M.McaG122ORF305P | |
| 310 | 529 aa hypothetical protein | |||
| 330 | DNA adenine methylase | |||
| ??? | M | M.Mca10126ORF396P (100% identity) | M.McaG122ORF335P | |
| 345 | oligoendopeptidase F family protein | |||
| 675 | transcription termination/antitermination | |||
| 680 | M | M2.Mca10126ORF329P (100% identity) | M1.McaG122ORF680P | |
| 685 | M | M1.Mca10126ORF329P (100% identity) | M2.McaG122ORF680P | |
| 690 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
| 2650 | transcription elongation factor GreA | |||
| 2655 | R | MgaIPTORF330P (25% identity) | McaG122ORF2660P | |
| ??? | M | M.Mca10126ORF925P (99% identity) | M.McaG122ORF2660P | |
| 2670 | 244 aa hypothetical protein | |||
| 2680 | alanine--tRNA ligase | |||
| 2685 | M | M.Mca10126ORF929P (100% identity) | M.McaG122ORF2685P | |
| 2690 | tRNA 2-thiouridine(34) synthase MnmA | |||
| 3175 | 91 aa hypothetical protein | |||
| 3180 | M | M.HbiAAQJHORF7880P (50% identity) | M.McaG122ORF3180P | |
| 3185 | 156 aa hypothetical protein | |||
| 3400 | redox-regulated ATPase YchF | |||
| 3405 | M | M.Mca10126ORF824P (100% identity) | M.McaG122ORF3405P | |
| 3410 | 246 aa hypothetical protein | |||
| 3420 | 193 aa hypothetical protein | |||
| 3425 | R | Mca10126ORF819P (100% identity) | McaG122ORF3430P | |
| 3430 | M | M.Mca10126ORF819P (100% identity) | M.McaG122ORF3430P | |
| 3435 | cation-transporting P-type ATPase | |||
| 4200 | ATP-binding protein | |||
| 4205 | M | M.Mca10126ORF693P (99% identity) | M.McaG122ORF4205P | |
| 4210 | M17 family metallopeptidase | |||
| 4685 | 161 aa hypothetical protein | |||
| 4690 | R | Mca10126ORF598P (100% identity) | McaG122ORF4695P | |
| 4695 | M | M.Mca10126ORF598P (100% identity) | M.McaG122ORF4695P | |
| 4705 | 89 aa hypothetical protein | |||
| 4810 | APC family permease | |||
| 4815 | M | M.Mca10126ORF583P (100% identity) | M.McaG122ORF4815P | |
| 4820 | 99 aa hypothetical protein | |||
| 4825 | R | Mca10126ORF581P (100% identity) | McaG122ORF4815P | |
| 4830 | 1-phosphofructokinase | |||
| 4885 | variable surface lipoprotein | |||
| 4890 | M | M.Mca10126ORF567P (100% identity) | M.McaG122ORF4890P | |
| 4895 | aminotransferase class V-fold PLP-dependent | |||
| 5170 | signal recognition particle-docking protein | |||
| ??? | R | Mca10126ORF522P (100% identity) | McaG122ORF5185P | |
| 5185 | M | M2.Mca10126ORF522P (100% identity) | M1.McaG122ORF5185P | |
| 5190 | M | M1.Mca10126ORF522P (100% identity) | M2.McaG122ORF5185P | |
| 5195 | alpha/beta hydrolase | |||
| 5575 | phosphatidate cytidylyltransferase | |||
| ??? | M | M.Mca10126ORF466P (99% identity) | M.McaG122ORF5580P | |
| 5585 | 234 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | 177 aa hypothetical protein | |||
| ??? | R | Mca10126ORF410P (100% identity) | McaG122ORF265P | |
| ??? | M | M.Mca10126ORF410P (69% identity) | M.McaG122ORF265P | |
| 275 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | |||
| 4280 | 51 aa hypothetical protein | |||
| ??? | R | Mca10126ORF674P (98% identity) | McaG122ORF4295P | |
| ??? | M | M.Mca10126ORF674P (100% identity) | M.McaG122ORF4295P | |
| 4305 | 71 aa hypothetical protein | |||