Mycoplasmopsis citelli RG-2C |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasmopsis citelli RG-2C RM systems
Ref: Spergser,J. unpublished
REBASE ref # 27781
Complete sequence: 1,228,646 bp
GenBank #: CP101807
REBASE acronym: Mci
Org_num: 60699
All begin NPA08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1935 | 156 aa hypothetical protein | |||
| 1940 | S | S4.Mci10181ORF39P (64% identity) | S2.MciORF1950P | |
| 1945 | R | Mci10181ORF39P (98% identity) | MciORF1950P | |
| 1950 | M | M.Mci10181ORF39P (99% identity) | M.MciORF1950P | |
| 1955 | S | S.MciORF3000P (68% identity) | S1.MciORF1950P | |
| 1960 | 79 aa hypothetical protein | |||
| 2995 | DNA gyrase subunit A | |||
| 3000 | S | S1.MciORF1950P (68% identity) | S.MciORF3000P | |
| 3005 | helix-hairpin-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 95 | TM2 domain-containing protein | |||
| ??? | M | M.MciORF4420P (88% identity) | M.MciORF105P | |
| 115 | 84 aa hypothetical protein | |||
| 155 | 106 aa hypothetical protein | |||
| 160 | R | Mci10181ORF656P (100% identity) | MciORF165P | |
| 165 | M | M.Mci10181ORF656P (99% identity) | M.MciORF165P | |
| 170 | 144 aa hypothetical protein | |||
| 590 | 149 aa hypothetical protein | |||
| 595 | RM | Mci10181ORF623P (93% identity) | MciORF595P | |
| 600 | S | S.Mci10181ORF623P (86% identity) | S.MciORF595P | |
| 605 | 687 aa hypothetical protein | |||
| 1080 | 122 aa hypothetical protein | |||
| 1085 | R | Mci10181IIIP (100% identity) | GANTC | MciORF1090P |
| 1090 | M | M.Mci10181III (99% identity) | GANTC | M.MciORF1090P |
| 1095 | ATP-binding protein | |||
| 1110 | 282 aa hypothetical protein | |||
| 1115 | M | M.Mci10181ORF859P (97% identity) | M.MciORF1115P | |
| 1120 | 65 aa hypothetical protein | |||
| 1230 | phosphopyruvate hydratase | |||
| 1235 | M | M.Mci10181ORF833P (97% identity) | M.MciORF1235P | |
| 1240 | cation-translocating P-type ATPase | |||
| 2440 | DNA polymerase III subunit alpha | |||
| ??? | M | M.Mcl10199ORF2320P (38% identity) | M.MciORF2445P | |
| 2450 | transglutaminase domain-containing protein | |||
| 2775 | 30S ribosomal protein S20 | |||
| 2780 | M | M.Mci10181ORF239P (99% identity) | M.MciORF2780P | |
| 2785 | single-stranded DNA-binding protein | |||
| 4090 | DNA topoisomerase IV subunit A | |||
| 4100 | M | M.Lin11D1ORF3700P (72% identity) | M.MciORF4100P | |
| 4105 | R | Ssp72ORF7415P (34% identity) | MciORF4100BP | |
| 4110 | IS3 family transposase | |||
| 4115 | R | Gmo1501ORF4405P (28% identity) | MciORF4100AP | |
| 4120 | 91 aa hypothetical protein | |||
| 4415 | 220 aa hypothetical protein | |||
| 4420 | M | M.Mci10181ORF647P (100% identity) | M.MciORF4420P | |
| 4425 | 210 aa hypothetical protein | |||
| 4535 | 207 aa hypothetical protein | |||
| 4540 | M | M.Mci10181II (99% identity) | TCNNGA | M.MciORF4540P |
| 4545 | 133 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2970 | rRNA pseudouridine synthase | |||
| 2975 | M | M2.Mci10181ORF279P (85% identity) | M1.MciORF2975P | |
| ??? | M | M2.Msp1578dORF1215P (66% identity) | M2.MciORF2975P | |
| 2990 | R | Mci10181ORF279P (63% identity) | MciORF2975P | |
| 2995 | DNA gyrase subunit A | |||
| 3270 | thermonuclease family protein | |||
| 3275 | R | Mci10181ORF343P (99% identity) | MciORF3280P | |
| 3280 | M | M.Mci10181ORF343P (98% identity) | M.MciORF3280P | |
| 3285 | 50S ribosomal protein L20 | |||