Vibrio campbellii LJC011 |
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Putative Vibrio campbellii LJC011 RM systems
Ref: Liang,J. and Zhang,X.-H. unpublished
REBASE ref # 34974
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,332,606 bp | CP050478 |
| chromosome 2: | 1,938,459 bp | CP050479 |
REBASE acronym: VcaC011
Org_num: 60690
All begin HB764_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 23815 | restriction endonuclease | |||
| 23820 | R | VcaBoB90ORF995P (98% identity) | VcaC011ORF23840P | |
| 23825 | S | S.KpnJA29ORFDP (53% identity) | S.VcaC011ORF23840P | |
| 23830 | AAA family ATPase | |||
| 23835 | 277 aa hypothetical protein | |||
| 23840 | M | M.Vvu167680ORFBP (97% identity) | M.VcaC011ORF23840P | |
| 23845 | phosphatidylserine/phosphatidylglycerophosphate/ | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5220 | 337 aa hypothetical protein | |||
| 5225 | R | Vsp43153DptFP (98% identity) | VcaC011DptFP | |
| 5230 | DNA phosphorothioation-dependent restriction | |||
| 5225 | DNA phosphorothioation-dependent restriction | |||
| 5230 | R | Vsp002DptGP (98% identity) | VcaC011DptGP | |
| 5235 | DNA phosphorothioation-dependent restriction | |||
| 5230 | DNA phosphorothioation-dependent restriction | |||
| 5235 | R | Vvu054DptHP (98% identity) | VcaC011DptHP | |
| 5240 | 164 aa hypothetical protein | |||
| 5245 | DGQHR domain-containing protein | |||
| 5250 | M | M.VcaIFL1DndEP (91% identity) | M.VcaC011DndEP | |
| 5255 | DNA sulfur modification protein DndD | |||
| 5250 | DNA sulfur modification protein DndE | |||
| 5255 | M | M.Vsp002DndDP (97% identity) | M.VcaC011DndDP | |
| 5260 | DNA phosphorothioation system sulfurtransferase | |||
| 5255 | DNA sulfur modification protein DndD | |||
| 5260 | M | M.Vsp002DndCP (99% identity) | M.VcaC011DndCP | |
| 5265 | DNA sulfur modification protein DndB | |||
| 5260 | DNA phosphorothioation system sulfurtransferase | |||
| 5265 | M | M.VcaIFL1DndBP (99% identity) | M.VcaC011DndBP | |
| 5270 | DNA phosphorothioation-associated putative | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 23785 | 530 aa hypothetical protein | |||
| 23790 | R | VvuV252ORF1955P (90% identity) | VcaC011ORF23790P | |
| 23795 | (deoxy)nucleoside triphosphate | |||
| 23810 | helix-turn-helix transcriptional regulator | |||
| 23815 | R | VcaBoB90MrrP (97% identity) | VcaC011MrrP | |
| 23820 | DEAD/DEAH box helicase family protein | |||