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Putative Treponema putidum OMZ 835 RM systems
Ref: Chan,Y. et al. unpublished
REBASE ref # 34972
Complete sequence: 2,762,635 bp
GenBank #: CP038804
REBASE acronym: Tpu835
Org_num: 60686
All begin E4N74_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
630 | magnesium chelatase | |||
635 | S | S1.Tde33520aORF2475P (31% identity) | S1.Tpu835ORF635P | |
640 | helix-turn-helix domain-containing protein | |||
645 | type II toxin-antitoxin system RelE/ParE family | |||
650 | S | S.Tpu758ORFAP (79% identity) | S2.Tpu835ORF635P | |
655 | type I R-M system S protein | |||
660 | haloacid dehalogenase-like hydrolase | |||
665 | R | Tpu758ORF6675P (100% identity) | Tpu835ORF635P | |
670 | Na+/H+ antiporter NhaC family protein | |||
1045 | GNAT family N-acetyltransferase | |||
1050 | R | Tpu846ORF1025P (99% identity) | Tpu835ORF1055P | |
1055 | M | M.Tpu846ORF1025P (99% identity) | M.Tpu835ORF1055P | |
1060 | cell filamentation protein Fic | |||
1065 | S | S1.TdeH22I (68% identity) | S1.Tpu835ORF1055P | |
1070 | type II toxin-antitoxin system RelE/ParE family | |||
1075 | tetratricopeptide repeat protein | |||
1080 | integrase | |||
1085 | S | S3.Tpu847ORF1695P (91% identity) | S2.Tpu835ORF1055P | |
1090 | S | S1.TspB152ORF210P (58% identity) | S3.Tpu835ORF1055P | |
1095 | ISAs1 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
70 | 236 aa hypothetical protein | |||
75 | M | M.Tpu847ORF725P (99% identity) | M.Tpu835ORF75P | |
80 | MFS transporter | |||
905 | N-acetyltransferase | |||
910 | RM | Tpu846ORF880P (98% identity) | Tpu835ORF910P | |
915 | YitT family protein | |||
2935 | 288 aa hypothetical protein | |||
2940 | M | M.Tpu847ORF3645P (98% identity) | M.Tpu835ORF2940P | |
2945 | 172 aa hypothetical protein | |||
5980 | DUF853 family protein | |||
5985 | M | M.Tpu847ORF6885P (100% identity) | TCTAGA | M.Tpu835ORF5985P |
5990 | R | Tpu847ORF6885P (100% identity) | TCTAGA | Tpu835ORF5985P |
5995 | Sua5/YciO/YrdC/YwlC family protein | |||
6245 | hydroxyacid dehydrogenase | |||
6250 | RM | Tpu846ORF6580P (64% identity) | Tpu835ORF6250P | |
6255 | 336 aa hypothetical protein | |||
6655 | 230 aa hypothetical protein | |||
6660 | R | Tpu758ORF12955P (99% identity) | Tpu835ORF6660P | |
6665 | phosphoribosylamine--glycine ligase | |||
10180 | 207 aa hypothetical protein | |||
10185 | M | M.Bsp3003ORFAP (54% identity) | M.Tpu835ORF10185P | |
10190 | AlwI family type II restriction endonuclease | |||
10185 | DNA cytosine methyltransferase | |||
10190 | R | Pba12565ORF8745P (94% identity) | Tpu835ORF10195P | |
10195 | M | M.FnuFNUORF7350P (95% identity) | M.Tpu835ORF10195P | |
10200 | DUF4272 domain-containing protein | |||
10480 | ABC transporter ATP-binding protein | |||
10485 | M | M.Tpu847ORF11500P (99% identity) | M.Tpu835ORF10485P | |
10490 | R | Tpu847ORF11500P (97% identity) | Tpu835ORF10485P | |
10495 | response regulator transcription factor | |||
11175 | TdeIII family type II restriction endonuclease | |||
11180 | M | M.Tpu846ORF12035P (99% identity) | M.Tpu835ORF11180P | |
11185 | fructose bisphosphate aldolase | |||
11500 | M20/M25/M40 family metallo-hydrolase | |||
11505 | M | M.EbaASTBgORFAP (75% identity) | M.Tpu835ORF11505P | |
11510 | XRE family transcriptional regulator | |||
11515 | R | AmuMucXORF8850P (78% identity) | Tpu835ORF11505P | |
11520 | 37 aa hypothetical protein | |||
11520 | 37 aa hypothetical protein | |||
11525 | M | M.Tpu847ORF12550P (100% identity) | M.Tpu835ORF11525P | |
11530 | R | Tpu847ORF12550P (98% identity) | Tpu835ORF11525P | |
11535 | 99 aa hypothetical protein | |||
12095 | 58 aa hypothetical protein | |||
12100 | RM | Tsp806ORF7820P (77% identity) | Tpu835ORF12100P | |
12105 | 207 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
11105 | bifunctional 4-hydroxy-2-oxoglutarate | |||
11110 | R | Tde853McrCP (76% identity) | Tpu835McrCP | |
11115 | R | Tde853McrBP (56% identity) | Tpu835McrBP | |
11120 | 204 aa hypothetical protein | |||
12315 | endonuclease/exonuclease/phosphatase family | |||
??? | R | TdeCD1McrBP (77% identity) | Tpu835McrB2P | |
12325 | R | Tpu758McrCP (98% identity) | Tpu835McrC2P | |
12330 | XRE family transcriptional regulator |