Treponema denticola ATCC 700768 |
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Putative Treponema denticola ATCC 700768 RM systems
Ref: Chan,Y. et al. unpublished
REBASE ref # 34972
Complete sequence: 2,920,478 bp
GenBank #: CP038800
REBASE acronym: Tde700768
Org_num: 60684
All begin E4N78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2240 | M3 family oligoendopeptidase | |||
| 2245 | S | S1.TdeSS8I (35% identity) | S4.Tde700768ORF2285P | |
| 2250 | S | S3.TdeOT2BORF210P (95% identity) | S3.Tde700768ORF2285P | |
| 2255 | tetratricopeptide repeat protein | |||
| 2260 | endonuclease/exonuclease/phosphatase family | |||
| 2265 | integrase | |||
| 2270 | S | S2.Tsp788ORF235P (99% identity) | S2.Tde700768ORF2285P | |
| 2275 | S | S1.TdeVII (70% identity) | S1.Tde700768ORF2285P | |
| 2280 | Fic family protein | |||
| 2285 | M | M.Tsp791ORF11140P (98% identity) | M.Tde700768ORF2285P | |
| 2290 | R | TdeVIIP (98% identity) | Tde700768ORF2285P | |
| 2295 | N-acetyltransferase | |||
| 2390 | Fic family protein | |||
| 2395 | M | M.Pme0301ORF8890P (54% identity) | M.Tde700768ORF2395P | |
| 2400 | R | Tde700768ORF2285P (92% identity) | Tde700768ORF2395P | |
| 2405 | N-acetyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1005 | DUF87 domain-containing protein | |||
| 1010 | M | M.Tsp798ORF4490P (99% identity) | M.Tde700768ORF1010P | |
| 1015 | Rpn family recombination-promoting | |||
| 4300 | single-stranded DNA-binding protein | |||
| 4305 | M | M.TdeOT2BORF1680P (53% identity) | M.Tde700768ORF4305P | |
| 4310 | 370 aa hypothetical protein | |||
| 5655 | HEPN domain-containing protein | |||
| 5660 | M | M.Tsp791ORF4485P (97% identity) | M.Tde700768ORF5660P | |
| 5665 | R | Tpa843ORF6700P (97% identity) | Tde700768ORF5660P | |
| 5670 | type II toxin-antitoxin system | |||
| 8775 | 230 aa hypothetical protein | |||
| 8780 | R | TdeI (99% identity) | GATC | Tde700768ORF8780P |
| 8785 | phosphoribosylamine--glycine ligase | |||
| 8840 | DNA-binding protein | |||
| 8845 | RM | Tde898ORF3640P (89% identity) | Tde700768ORF8845P | |
| 8850 | type II restriction endonuclease | |||
| 10205 | 292 aa hypothetical protein | |||
| 10210 | RM | Tsp788ORF9020P (55% identity) | Tde700768ORF10210P | |
| 10215 | aminotransferase class V-fold PLP-dependent | |||
| 11155 | MFS transporter | |||
| 11160 | M | M.Tde854ORF9140P (95% identity) | M.Tde700768ORF11160P | |
| 11165 | oligoendopeptidase F | |||
| 12720 | class I SAM-dependent RNA methyltransferase | |||
| 12725 | RM | Tde898ORF830P (97% identity) | Tde700768ORF12725P | |
| 12730 | 1058 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2320 | endopeptidase La | |||
| 2325 | R | TdeCD1McrCP (91% identity) | Tde700768McrCP | |
| 2330 | R | Tpu847McrBP (72% identity) | Tde700768McrBP | |
| 2335 | 106 aa hypothetical protein | |||