Escherichia coli TUM13735 |
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Putative Escherichia coli TUM13735 RM systems
Ref: Ikegaya,K. et al. unpublished
REBASE ref # 34910
| Sequence length: | GenBank #: | |
| Chromosome: | 4,884,868 bp | AP026514 |
| plasmid pMTY13735_IncFII: | 170,530 bp | AP026515 |
REBASE acronym: Eco13735
Org_num: 60399
All begin TUM13735_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4130 | 165 aa hypothetical protein | |||
| 4140 | R | EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | Eco13735ORF4170P |
| 4150 | 397 aa hypothetical protein | |||
| 4160 | S | S.EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | S.Eco13735ORF4170P |
| 4170 | M | M.EcoW004ORF18655P (100% identity) | GCCANNNNNGTG | M.Eco13735ORF4170P |
| 4180 | 325 aa hypothetical protein | |||
| 4800 | 237 aa hypothetical protein | |||
| 4810 | R | EcoZ247ORF19790P (100% identity) | Eco13735ORF4830P | |
| 4820 | S | S.EcoZ247ORF19790P (100% identity) | S.Eco13735ORF4830P | |
| 4830 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco13735ORF4830P | |
| 4840 | 699 aa hypothetical protein | |||
| 8310 | 156 aa hypothetical protein | |||
| 8320 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco13735ORF8330P |
| 8330 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco13735ORF8330P |
| 8340 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco13735ORF8330P |
| 8350 | 260 aa hypothetical protein | |||
| 42290 | IS66 family transposase | |||
| 42300 | R | EcoF247ORF27750P (100% identity) | GACNNNNNTRRG | Eco13735ORF42320P |
| 42310 | S | S.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | S.Eco13735ORF42320P |
| 42320 | M | M.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | M.Eco13735ORF42320P |
| 42330 | IS2 repressor TnpA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4110 | integrase | |||
| 4120 | R | EcoW004ORF18630P (100% identity) | GAAC | Eco13735ORF4120P |
| 4130 | 165 aa hypothetical protein | |||
| 24440 | inner membrane transporter YedA | |||
| 24450 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco13735DcmP |
| 24460 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco13735DcmP |
| 24470 | phosphohydrolase | |||
| 37760 | DNA-binding protein Fis | |||
| 37770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco13735ORF37770P |
| 37780 | acrEF/envCD operon transcriptional regulator | |||
| 38870 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13735DamP |
| 38890 | cell division protein DamX | |||
| plasmid pMTY13735_IncFII | ||||
| 45430 | 73 aa hypothetical protein | |||
| 45440 | M | M.SspPIBORF23080P (100% identity) | M.Eco13735ORF45440P | |
| 45450 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4830 | restriction endonuclease subunit M | |||
| 4840 | R | EcoW004GmrDP (100% identity) | Eco13735GmrSDP | |
| 4850 | 244 aa hypothetical protein | |||