Escherichia coli TUM9754 |
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Putative Escherichia coli TUM9754 RM systems
Ref: Ikegaya,K. et al. unpublished
REBASE ref # 34910
| Sequence length: | GenBank #: | |
| Chromosome: | 4,784,280 bp | AP026487 |
| plasmid pMTY9754_NA1: | 152,942 bp | AP026488 |
| plasmid pMTY9754_p0111: | 103,767 bp | AP026489 |
REBASE acronym: EcoM9754
Org_num: 60409
All begin TUM9754_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19220 | 388 aa hypothetical protein | |||
| 19230 | M | M.EcoS1632ORFHP (100% identity) | M.EcoM9754ORF19230P | |
| 19240 | S | S.EcoP61ORF9315P (100% identity) | S.EcoM9754ORF19230P | |
| 19250 | R | EcoS1632ORFHP (100% identity) | EcoM9754ORF19230P | |
| 19260 | metal-dependent hydrolase | |||
| 39550 | repressor TnpA | |||
| 39560 | S | S.EcoS1632ORFHP (73% identity) | S1.EcoM9754ORF39560P | |
| 39570 | R | EcoS1632ORFHAP (100% identity) | EcoM9754ORF39560AP | |
| 39580 | IS2 repressor TnpA | |||
| 39590 | integrase | |||
| 39600 | R | EcoS7380ORFEP (78% identity) | EcoM9754ORF39560BP | |
| 39610 | transcriptional regulator | |||
| 39620 | 164 aa hypothetical protein | |||
| 39630 | 281 aa hypothetical protein | |||
| 39640 | resolvase | |||
| 39650 | 253 aa hypothetical protein | |||
| 39660 | transposase | |||
| ??? | S | S2.EcoP61ORF19865P (100% identity) | S2.EcoM9754ORF39560P | |
| 39680 | aldehyde reductase Ahr | |||
| 41090 | 61 aa hypothetical protein | |||
| 41100 | R | EcoLH85aORF4700P (98% identity) | EcoM9754ORF41110P | |
| 41110 | M | M.EcoBL08ORF9090P (100% identity) | M.EcoM9754ORF41110P | |
| 41120 | IS5 family transposase | |||
| plasmid pMTY9754_p0111 | ||||
| 48690 | 73 aa hypothetical protein | |||
| 48700 | M | M.EcoS1632ORFBP (100% identity) | M.EcoM9754ORF48700P | |
| 48710 | S | S.EcosS142ORF43560P (100% identity) | S1.EcoM9754ORF48700P | |
| 48720 | R | EcoS1632ORFBP (100% identity) | EcoM9754ORF48700P | |
| 48730 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3910 | cell division protein DamX | |||
| 3920 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoM9754DamP |
| 3930 | ribulose-phosphate 3-epimerase | |||
| 5080 | acrEF/envCD operon repressor | |||
| 5090 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoM9754ORF5090P |
| 5100 | integrase | |||
| 10970 | 75 aa hypothetical protein | |||
| 10980 | M | M.Eco79TORF11430P (83% identity) | M.EcoM9754ORF10980P | |
| 10990 | replication endonuclease from | |||
| 18620 | 142 aa hypothetical protein | |||
| 18630 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoM9754DcmP |
| 18640 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoM9754DcmP |
| 18650 | inner membrane transporter YedA | |||
| 29960 | replication endonuclease from | |||
| 29970 | M | M.EcoS1632ORFIP (100% identity) | GATC | M.EcoM9754ORF29970P |
| 29980 | 75 aa hypothetical protein | |||
| 35660 | phage holin, lambda family protein | |||
| 35670 | M | M.EcoS6685ORFBBP (100% identity) | M.EcoM9754ORF35670P | |
| 35680 | 67 aa hypothetical protein | |||
| 35740 | LexA family transcriptional regulator | |||
| 35750 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.EcoM9754ORF35750P |
| 35760 | 57 aa hypothetical protein | |||
| 39520 | 9-O-acetyl-N-acetylneuraminic acid | |||
| 39530 | R | EcoS1632ORFGP (94% identity) | EcoM9754ORF39530P | |
| 39540 | transposase | |||
| 42940 | LexA family transcriptional regulator | |||
| 42950 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoM9754ORF42950P |
| 42960 | 83 aa hypothetical protein | |||
| plasmid pMTY9754_NA1 | ||||
| 47070 | 369 aa hypothetical protein | |||
| 47080 | M | M.EcoECY44ORF1570P (100% identity) | M.EcoM9754ORF47080P | |
| 47090 | 73 aa hypothetical protein | |||
| plasmid pMTY9754_p0111 | ||||
| 48190 | transposase InsF for insertion sequence IS3E | |||
| 48200 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoM9754ORF48200P |
| 48210 | 55 aa hypothetical protein | |||