Escherichia coli TUM1881 |
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Putative Escherichia coli TUM1881 RM systems
Ref: Ikegaya,K. et al. unpublished
REBASE ref # 34910
| Sequence length: | GenBank #: | |
| Chromosome: | 5,180,264 bp | AP026447 |
| plasmid pMTY1881_IncI1-I(Alpha): | 121,438 bp | AP026449 |
| plasmid pMTY1881_IncN: | 49,245 bp | AP026450 |
| plasmid pMTY1881_NA1: | 138,779 bp | AP026448 |
| plasmid pMTY1881_NA2: | 6,267 bp | AP026451 |
REBASE acronym: Eco1881
Org_num: 60401
All begin TUM1881_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21020 | transposase | |||
| 21040 | S | S.EcoM1881ORF10790P (100% identity) | S.Eco1881ORF21040P | |
| 21050 | 227 aa hypothetical protein | |||
| 21060 | R | EcoM1881ORF10790P (100% identity) | Eco1881ORF21040P | |
| 21070 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4480 | acrEF/envCD operon repressor | |||
| 4490 | M | M.EcoM1881ORF2275P (100% identity) | ATGCAT | M.Eco1881ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 13220 | 98 aa hypothetical protein | |||
| 13230 | M | M.SenYU39ORF1896P (100% identity) | M.Eco1881ORF13230P | |
| 13240 | ribosome-associated inhibitor A | |||
| 19920 | 65 aa hypothetical protein | |||
| 19930 | M | M.EcoM1881ORF10220P (100% identity) | M.Eco1881ORF19930P | |
| 19940 | 83 aa hypothetical protein | |||
| 20490 | 231 aa hypothetical protein | |||
| 20500 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco1881DcmP |
| 20510 | V | V.EcoM1881DcmP (100% identity) | V.Eco1881DcmP | |
| 20520 | inner membrane transporter YedA | |||
| 24330 | 65 aa hypothetical protein | |||
| 24340 | M | M.EcoM1881ORF12490P (100% identity) | M.Eco1881ORF24340P | |
| 24350 | 104 aa hypothetical protein | |||
| 26090 | 131 aa hypothetical protein | |||
| 26100 | M | M.EcoM1881ORF13390P (100% identity) | M.Eco1881ORF26100P | |
| 26110 | 88 aa hypothetical protein | |||
| 26220 | 65 aa hypothetical protein | |||
| 26230 | M | M.EcoM1881ORF13465P (100% identity) | M.Eco1881ORF26230P | |
| 26240 | 104 aa hypothetical protein | |||
| 30200 | 65 aa hypothetical protein | |||
| 30210 | M | M.EcoM1881ORF15505P (100% identity) | M.Eco1881ORF22000P | |
| 30220 | 72 aa hypothetical protein | |||
| 37220 | phage holin, lambda family protein | |||
| 37230 | M | M.EcoSTEC413ORF8565P (100% identity) | M.Eco1881ORF37230P | |
| 37240 | 64 aa hypothetical protein | |||
| 37300 | protein ninX | |||
| 37310 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1881ORF37310P |
| 37320 | protein ninB | |||
| 45300 | 5-nucleotidase | |||
| 45310 | R | EcoM1881ORF23270P (100% identity) | GAAC | Eco1881ORF45310P |
| 45320 | integrase | |||
| plasmid pMTY1881_IncI1-I(Alpha) | ||||
| 53530 | 308 aa hypothetical protein | |||
| 53540 | M | M.Sfl60ORF25670P (100% identity) | SAY | M.Eco1881ORF53540P |
| 53550 | 73 aa hypothetical protein | |||
| plasmid pMTY1881_IncN | ||||
| 54560 | IS6 family transposase | |||
| 54570 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco1881ORF54580P |
| 54580 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Eco1881ORF54580P |
| 54590 | 88 aa hypothetical protein | |||
| plasmid pMTY1881_NA1 | ||||
| 53000 | 73 aa hypothetical protein | |||
| 53010 | M | M.EcoM1881ORF27285P (98% identity) | M.Eco1881ORF53010P | |
| 53020 | 308 aa hypothetical protein | |||
| plasmid pMTY1881_NA2 | ||||
| 55080 | 147 aa hypothetical protein | |||
| 55100 | M | M.StyD4I (95% identity) | CCNGG | M.Eco1881ORF55100P |
| 55110 | R | SflFF34ORF24420P (100% identity) | CCNGG | Eco1881ORF55100P |
| 55120 | rop protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7400 | 612 aa hypothetical protein | |||
| 7410 | M | M.EcoSO178ORF20185P (100% identity) | GTCTC | M.Eco1881ORF7410P |
| 7420 | R | EcoM1881ORF3760P (100% identity) | GTCTC | Eco1881ORF7410P |
| 7430 | transposase | |||