Salmonella enterica SC2016042 |
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Putative Salmonella enterica SC2016042 RM systems
Ref: Peng,K. et al. unpublished
REBASE ref # 34931
Complete sequence: 4,950,959 bp
GenBank #: CP101373
REBASE acronym: Sen16042
Org_num: 60481
All begin NMU32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20485 | restriction endonuclease | |||
| 20490 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen16042ORF20495P |
| 20495 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen16042ORF20495P |
| 20500 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen16042ORF20495P |
| 20505 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen16042DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen16042ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 6035 | thermonuclease family protein | |||
| 6040 | M | M.StyCORF187P (49% identity) | M.Sen16042ORF6040P | |
| 6045 | IS6-like element IS26 family transposase | |||
| 9775 | PerC family transcriptional regulator | |||
| 9780 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen16042ORF9780P |
| 9785 | RusA family crossover junction | |||
| 10030 | phosphohydrolase | |||
| 10035 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen16042DcmP |
| 10040 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen16042DcmP |
| 10045 | drug/metabolite exporter YedA | |||
| 20645 | BREX system P-loop protein BrxC | |||
| 20650 | RM | StyUK1IV (100% identity) | GATCAG | Sen16042ORF20650P |
| 20655 | AAA family ATPase | |||
| 22135 | LexA family transcriptional regulator | |||
| 22140 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen16042ORF22140P |
| 22145 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18180 | small effector SsaA | |||
| 18185 | R | StyUK1IP (99% identity) | CAGAG | Sen16042ORF18190P |
| 18190 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen16042ORF18190P |
| 18195 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20480 | BrnT family toxin | |||
| 20485 | R | StyUK1MrrP (100% identity) | Sen16042MrrP | |
| 20490 | type I restriction-modification system | |||