Salmonella enterica SC2016025 |
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Putative Salmonella enterica SC2016025 RM systems
Ref: Peng,K. et al. unpublished
REBASE ref # 34931
Complete sequence: 5,245,093 bp
GenBank #: CP101372
REBASE acronym: Sen16025
Org_num: 60480
All begin NMU31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22045 | restriction endonuclease | |||
| 22050 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen16025ORF22055P |
| 22055 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen16025ORF22055P |
| 22060 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen16025ORF22055P |
| 22065 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen16025DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen16025ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 3235 | DUF2732 domain-containing protein | |||
| 3240 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen16025ORF3240P |
| 3245 | replication endonuclease | |||
| 5420 | 277 aa hypothetical protein | |||
| 5425 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen16025ORF5425P |
| 5430 | DNA-binding protein | |||
| 5540 | 202 aa hypothetical protein | |||
| 5545 | M | M.YpsF1ORFBP (100% identity) | M.Sen16025ORF5545P | |
| 5550 | 48 aa hypothetical protein | |||
| 6195 | thermonuclease family protein | |||
| 6200 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen16025ORF6200P |
| 6205 | 55 aa hypothetical protein | |||
| 7575 | thermonuclease family protein | |||
| 7580 | M | M.StyCORF187P (49% identity) | M.Sen16025ORF7580P | |
| 7585 | IS6-like element IS26 family transposase | |||
| 11315 | PerC family transcriptional regulator | |||
| 11320 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen16025ORF11320P |
| 11325 | RusA family crossover junction | |||
| 11570 | phosphohydrolase | |||
| 11575 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen16025DcmP |
| 11580 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen16025DcmP |
| 11585 | drug/metabolite exporter YedA | |||
| 22205 | BREX system P-loop protein BrxC | |||
| 22210 | RM | StyUK1IV (100% identity) | GATCAG | Sen16025ORF22210P |
| 22215 | AAA family ATPase | |||
| 23695 | LexA family transcriptional regulator | |||
| 23700 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen16025ORF23700P |
| 23705 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19740 | small effector SsaA | |||
| 19745 | R | StyUK1IP (99% identity) | CAGAG | Sen16025ORF19750P |
| 19750 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen16025ORF19750P |
| 19755 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22040 | BrnT family toxin | |||
| 22045 | R | StyUK1MrrP (100% identity) | Sen16025MrrP | |
| 22050 | type I restriction-modification system | |||