Escherichia coli EC204A1 |
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Putative Escherichia coli EC204A1 RM systems
Ref: Tang,B. et al. unpublished
REBASE ref # 34907
| Sequence length: | GenBank #: | |
| Chromosome: | 5,039,467 bp | CP100025 |
| plasmid p204A1-106K: | 106,846 bp | CP100029 |
| plasmid p204A1-109K: | 109,468 bp | CP100028 |
| plasmid p204A1-114K: | 114,352 bp | CP100027 |
| plasmid p204A1-223K-mcr3: | 223,975 bp | CP100026 |
| plasmid p204A1-64K: | 64,280 bp | CP100030 |
REBASE acronym: Eco4A1
Org_num: 60381
All begin MZH44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4050 | transposase | |||
| 4055 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco4A1ORF4060P |
| 4060 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco4A1ORF4060P |
| 4065 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco4A1ORF4060P |
| 4070 | AAA family ATPase | |||
| 21175 | DUF4942 domain-containing protein | |||
| 21180 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.Eco4A1ORF21180P |
| 21185 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.Eco4A1ORF21180P |
| 21190 | R | SflFF22ORF2075P (81% identity) | GACNNNNNNRTAAY | Eco4A1ORF21180AP |
| 21195 | IS1-like element IS1B family transposase | |||
| 21200 | R | SsoSE61ORF6540P (19% identity) | GACNNNNNNRTAAY | Eco4A1ORF21180BP |
| 21210 | NADPH-dependent aldehyde reductase Ahr | |||
| plasmid p204A1-114K | ||||
| 26295 | DNA polymerase III subunit theta | |||
| 26300 | M | M.Eco61769ORF3410P (99% identity) | M.Eco4A1ORF26300P | |
| 26305 | S | S.Ecos81ORF3955P (37% identity) | S1.Eco4A1ORF26300P | |
| 26310 | IS30-like element ISApl1 family transposase | |||
| 26315 | S | S.EcoRL21ORF23455P (53% identity) | S2.Eco4A1ORF26300P | |
| 26320 | R | EcoC1722ORF24070P (99% identity) | Eco4A1ORF26300P | |
| 26325 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco4A1ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 6560 | HigA family addiction module antitoxin | |||
| 6565 | RM | SflFF22ORF15405P (100% identity) | Eco4A1ORF6565P | |
| 6570 | DEAD/DEAH box helicase | |||
| 7370 | recombination protein NinB | |||
| 7375 | M | M.SflN97ORF15810P (98% identity) | GATC | M.Eco4A1ORF7375P |
| 7380 | NinE family protein | |||
| 9925 | phosphohydrolase | |||
| 9930 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4A1DcmP |
| 9935 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco4A1DcmP |
| 9940 | drug/metabolite exporter YedA | |||
| 20670 | phage lysis protein EssD | |||
| 20675 | M | M.Sso63633ORF22290P (100% identity) | M.Eco4A1ORF20675P | |
| 20680 | 67 aa hypothetical protein | |||
| 20710 | LexA family transcriptional regulator | |||
| 20715 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco4A1ORF20715P |
| 20720 | PerC family transcriptional regulator | |||
| plasmid p204A1-106K | ||||
| 27650 | 73 aa hypothetical protein | |||
| 27655 | M | M.Xca80ORFEP (100% identity) | M.Eco4A1ORF27655P | |
| 27660 | 97 aa hypothetical protein | |||
| plasmid p204A1-114K | ||||
| 26430 | 85 aa hypothetical protein | |||
| 26435 | M | M.EfeC13ORF24760P (100% identity) | M.Eco4A1ORF26435P | |
| 26440 | recombination-associated protein RdgC | |||
| plasmid p204A1-223K-mcr3 | ||||
| 25240 | thermonuclease family protein | |||
| 25245 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco4A1ORF25245P |
| 25250 | 55 aa hypothetical protein | |||
| 25360 | recombinase family protein | |||
| 25365 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco4A1ORF25370P |
| 25370 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco4A1ORF25370P |
| 25375 | IS1 family transposase | |||
| 25710 | 48 aa hypothetical protein | |||
| 25715 | M | M.YpsF1ORFBP (100% identity) | M.Eco4A1ORF25715P | |
| 25720 | 202 aa hypothetical protein | |||
| 25825 | DNA-binding protein | |||
| 25830 | M | M.YpsF1ORFDP (95% identity) | M.Eco4A1ORF25830P | |
| 25835 | 284 aa hypothetical protein | |||
| plasmid p204A1-64K | ||||
| 27790 | 103 aa hypothetical protein | |||
| 27795 | M | M.Sfl60ORF25670P (100% identity) | SAY | M.Eco4A1ORF27795P |
| 27800 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p204A1-109K | ||||
| 27025 | 76 aa hypothetical protein | |||
| 27030 | M | M.Sso524ORF460P (100% identity) | GATC | M.Eco4A1ORF27030P |
| 27035 | 269 aa hypothetical protein | |||