Xanthomonas hortorum jj2001 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas hortorum jj2001 RM systems
Ref: Lee,M.-H. and Kong,H.G. unpublished
REBASE ref # 34942
Complete sequence: 5,443,372 bp
GenBank #: CP101417
REBASE acronym: Xho2001
Org_num: 60576
All begin NMB96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12090 | type II toxin-antitoxin system RelE/ParE family | |||
| 12095 | R | Xho108ORF17790P (99% identity) | Xho2001ORF12110P | |
| 12100 | transcriptional regulator | |||
| 12105 | 240 aa hypothetical protein | |||
| 12110 | M | M.Xho108ORF17790P (100% identity) | M.Xho2001ORF12110P | |
| 12115 | S | S.PpuR51ORF17905P (64% identity) | S.Xho2001ORF12110P | |
| 12120 | 98 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2430 | helix-turn-helix domain-containing protein | |||
| 2435 | M | M.XcaCN18ORFAP (88% identity) | M.Xho2001ORF2435P | |
| 2440 | R | XcaCN18ORFAP (97% identity) | Xho2001ORF2435P | |
| 2445 | 742 aa hypothetical protein | |||
| 3770 | AAA family ATPase | |||
| 3775 | M | M.Xar1630ORFAP (88% identity) | M1.Xho2001ORF3775P | |
| 3780 | M | M1.Ppr1544ORF4175P (48% identity) | M2.Xho2001ORF3775P | |
| 3785 | IS1595 family transposase | |||
| 17550 | DEAD/DEAH box helicase | |||
| 17555 | RM | XfuC5ORF11500P (100% identity) | Xho2001ORF17555P | |
| 17560 | XRE family transcriptional regulator | |||
| 17620 | DNA topoisomerase III | |||
| 17625 | M | M.Xci8raORF12395P (100% identity) | M.Xho2001ORF17625P | |
| 17630 | 70 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3760 | transposase | |||
| 3765 | R | Xar1630McrCP (89% identity) | Xho2001McrCP | |
| 3770 | R | Xar1630McrBP (84% identity) | Xho2001McrBP | |
| 3775 | DNA (cytosine-5-)-methyltransferase | |||
| 15020 | NYN domain-containing protein | |||
| 15025 | R | Xca3077Mrr2P (97% identity) | Xho2001MrrP | |
| 15030 | ATP-binding protein | |||