Streptococcus suis 1521251 |
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Putative Streptococcus suis 1521251 RM systems
Ref: Fredriksen,S. unpublished
REBASE ref # 34885
Complete sequence: 2,310,771 bp
GenBank #: CP100431
REBASE acronym: Ssu1251
Org_num: 60300
All begin NLY77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2650 | site-specific integrase | |||
| 2655 | S | S2.SsuWTORFDP (95% identity) | S4.Ssu1251ORF2680P | |
| 2660 | R | SsuYB51ORFAP (100% identity) | Ssu1251ORF2680P | |
| 2665 | S | S3.Ssu5ORF8195P (100% identity) | S3.Ssu1251ORF2680P | |
| 2670 | S | S2.SsuYB51ORFAP (100% identity) | S2.Ssu1251ORF2680P | |
| 2675 | S | S.SsuiS10ORFAP (38% identity) | S1.Ssu1251ORF2680P | |
| 2680 | M | M.SsuTANI1ORF1593P (100% identity) | M.Ssu1251ORF2680P | |
| 2685 | serine--tRNA ligase | |||
| 4400 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 4405 | R | SsuS11ORF4455P (100% identity) | Ssu1251ORF4410P | |
| 4410 | M | M.SsuTRG6ORF4410P (100% identity) | M.Ssu1251ORF4410P | |
| 4415 | S | S1.Ssu105ORF3865P (97% identity) | S1.Ssu1251ORF4410P | |
| 4420 | tyrosine-type DNA invertase PsrA | |||
| 4425 | S | S2.Ssu1510ORF4210P (92% identity) | S2.Ssu1251ORF4410P | |
| 4430 | S | S1.SsuGX69ORF7625P (82% identity) | S3.Ssu1251ORF4410P | |
| 4435 | ribose-5-phosphate isomerase RpiA | |||
| 8900 | AAA family ATPase | |||
| ??? | S | S.SsuTRG6ORF8820P (100% identity) | S.Ssu1251ORF8915P | |
| 8915 | M | M.SsuTRG6ORF8820P (100% identity) | M.Ssu1251ORF8915P | |
| 8920 | R | SsuTRG6ORF8820P (100% identity) | Ssu1251ORF8915P | |
| 8925 | FAD-containing oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 250 | bifunctional | |||
| 255 | M | M1.SsuYB51ORFBP (100% identity) | GATC | M1.Ssu1251ORF255P |
| 260 | M | M2.SsuYB51ORFBP (100% identity) | GATC | M2.Ssu1251ORF255P |
| 265 | R | R1.SsuYB51ORFBP (100% identity) | GATC | R1.Ssu1251ORF255P |
| 270 | R | R2.SsuYB51ORFBP (100% identity) | GATC | R2.Ssu1251ORF255P |
| 275 | phosphoribosylamine--glycine ligase | |||
| 5205 | 142 aa hypothetical protein | |||
| 5210 | M | M.SsuD9ORF1083P (100% identity) | M.Ssu1251ORF5210P | |
| 5215 | replication initiator protein A | |||
| 5445 | 150 aa hypothetical protein | |||
| 5450 | M | M.SsuGX69ORF3500P (100% identity) | M.Ssu1251ORF5450P | |
| 5455 | DNA (cytosine-5-)-methyltransferase | |||
| 5450 | DNA (cytosine-5-)-methyltransferase | |||
| 5455 | M | M.SsuTRG6ORF5430P (100% identity) | M.Ssu1251ORF5455P | |
| 5460 | 74 aa hypothetical protein | |||
| 7745 | 70 aa hypothetical protein | |||
| ??? | M | M1.SsuTRG6ORFAP (100% identity) | M.Ssu1251ORFAP | |
| 7755 | 99 aa hypothetical protein | |||
| 7755 | 99 aa hypothetical protein | |||
| 7760 | M | M.SsuYZDH1ORF2310P (100% identity) | M.Ssu1251ORF7760P | |
| 7765 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8960 | IS200/IS605 family transposase | |||
| 8965 | R | SsuTRG6ORF8875P (100% identity) | Ssu1251ORF8970P | |
| 8970 | M | M.SsuT15ORF6640P (100% identity) | M.Ssu1251ORF8970P | |
| 8975 | DUF3885 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4775 | 262 aa hypothetical protein | |||
| 4780 | R | SsuTRG6McrBP (100% identity) | Ssu1251McrBP | |
| 4785 | R | SsuTRG6McrCP (100% identity) | Ssu1251McrCP | |
| 4790 | glutamine-hydrolyzing GMP synthase | |||