Treponema denticola OKA3 |
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Putative Treponema denticola OKA3 RM systems
Ref: Zeng,H. et al. unpublished
REBASE ref # 32485
Complete sequence: 2,853,053 bp
GenBank #: CP058347
REBASE acronym: TdeOKA3
Org_num: 60317
All begin E4N90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 205 | GNAT family N-acetyltransferase | |||
| 210 | R | TdeH22IP (99% identity) | TdeOKA3ORF215P | |
| 215 | M | M.Tde3500ORF810P (100% identity) | M.TdeOKA3ORF215P | |
| 220 | Fic family protein | |||
| 225 | S | S1.Tvi862ORF4715P (60% identity) | S1.TdeOKA3ORF215P | |
| 230 | S | S1.TspB152ORF210P (34% identity) | S2.TdeOKA3ORF215P | |
| 235 | tyrosine-type recombinase/integrase | |||
| 240 | S | S3.TdeSS8IP (97% identity) | S3.TdeOKA3ORF215P | |
| 245 | EamA family transporter | |||
| 11470 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate | |||
| 11475 | M | M.TdeSP63II (99% identity) | CYAANNNNNNNTTC | M.TdeOKA3ORF11475P |
| 11480 | S | S.TdeSP63II (100% identity) | CYAANNNNNNNTTC | S.TdeOKA3ORF11475P |
| 11485 | virulence RhuM family protein | |||
| 11490 | R | TdeSP63IIP (99% identity) | CYAANNNNNNNTTC | TdeOKA3ORF11475P |
| 11495 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2500 | leucine-rich repeat domain-containing protein | |||
| 2505 | M | M.TdeCF121ORF5325P (98% identity) | M.TdeOKA3ORF2505P | |
| 2510 | 55 aa hypothetical protein | |||
| 3760 | 87 aa hypothetical protein | |||
| 3765 | M | M.Tpu846ORF9495P (71% identity) | M1.TdeOKA3ORF3765P | |
| 3770 | 180 aa hypothetical protein | |||
| 3775 | M | M.Fsp291ORF113157P (44% identity) | M2.TdeOKA3ORF3765P | |
| 3780 | toprim domain-containing protein | |||
| 3995 | 151 aa hypothetical protein | |||
| 4000 | M | M1.Pgu3471ORF4000P (54% identity) | M.TdeOKA3ORF4000P | |
| 4005 | 246 aa hypothetical protein | |||
| 7420 | 230 aa hypothetical protein | |||
| 7425 | R | TdeSP43ORF6405P (99% identity) | GATC | TdeOKA3ORF7425P |
| 7430 | phosphoribosylamine--glycine ligase | |||
| 9840 | MFS transporter | |||
| 9845 | M | M.TdeSP43I (99% identity) | RAATTY | M.TdeOKA3ORF9845P |
| 9850 | paraslipin | |||
| 11815 | glutamate formimidoyltransferase | |||
| 11820 | R | Tde853ORF11155P (99% identity) | TdeOKA3ORF11825P | |
| 11825 | M | M.Tde853ORF11155P (75% identity) | M.TdeOKA3ORF11825P | |
| 11830 | V | M.Tde853ORF11155P (23% identity) | V.TdeOKA3ORF11825P | |
| 11835 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13150 | endonuclease/exonuclease/phosphatase family | |||
| 13155 | R | TdeCD1McrBP (99% identity) | TdeOKA3McrBP | |
| 13160 | R | TdeCD1McrCP (98% identity) | TdeOKA3McrCP | |
| 13165 | GNAT family N-acetyltransferase | |||