Faecalibacterium duncaniae NB2B-19-DCM |
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Putative Faecalibacterium duncaniae NB2B-19-DCM RM systems
Ref: Spreafico,A. et al. Nat Cancer (2022) In press
REBASE ref # 34529
Complete sequence: 2,788,407 bp
GenBank #: CP100125
REBASE acronym: FduDCM
Org_num: 60103
All begin NKF69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6280 | IS110 family transposase | |||
| 6285 | R | PmeBin74ORFCP (99% identity) | FduDCMORF6305P | |
| 6290 | 466 aa hypothetical protein | |||
| 6295 | S | S.FprA2165ORF8850P (99% identity) | S.FduDCMORF6305P | |
| 6300 | 304 aa hypothetical protein | |||
| 6305 | M | M.FprA2165ORF8850P (100% identity) | M.FduDCMORF6305P | |
| 6310 | recombinase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2765 | helix-turn-helix domain-containing protein | |||
| 2770 | M | M.FprFp944ORFLP (100% identity) | M.FduDCMORF2770P | |
| 2775 | 66 aa hypothetical protein | |||
| 5700 | NlpC/P60 family protein | |||
| 5705 | M | M.PmeBin450ORFDP (96% identity) | M.FduDCMORF5705P | |
| 5710 | PrgI family protein | |||
| 6260 | 274 aa hypothetical protein | |||
| 6265 | RM | PmeBin218ORFFP (99% identity) | FduDCMORF6265P | |
| 6270 | DEAD/DEAH box helicase | |||
| 6465 | C40 family peptidase | |||
| 6470 | M | M.PmeBin275ORFAP (98% identity) | M.FduDCMORF6470P | |
| 6475 | PrgI family protein | |||
| 8250 | 348 aa hypothetical protein | |||
| 8255 | RM | FspHTFFORF6820P (98% identity) | FduDCMORF8255BP | |
| 8260 | RM | FprA2165ORF6715P (35% identity) | FduDCMORF8255AP | |
| 8265 | helix-turn-helix domain-containing protein | |||
| 12115 | helix-turn-helix domain-containing protein | |||
| 12120 | M | M1.PmeBin124ORFCP (80% identity) | M.FduDCMORF12120P | |
| 12125 | plasmid mobilization relaxosome protein MobC | |||